Actinomyces israelii: NCTC12972_00285
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Entry
NCTC12972_00285 CDS
T06659
Symbol
ykoD
Name
(GenBank) Putative HMP/thiamine import ATP-binding protein YkoD
KO
K01552
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
air
Actinomyces israelii
Brite
KEGG Orthology (KO) [BR:
air00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
air02000
]
NCTC12972_00285 (ykoD)
Transporters [BR:
air02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
NCTC12972_00285 (ykoD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
nSTAND1
AAA_23
AAA_28
AAA_25
AAA_18
AAA_16
RsgA_GTPase
NACHT
Rad17
AAA_5
AAA_14
Mg_chelatase
ATPase_2
TsaE
AAA_33
AAA_30
nSTAND3
FtsK_SpoIIIE
ABC_ATPase
T2SSE
cobW
AAA_13
DUF1284
MeaB
Motif
Other DBs
NCBI-ProteinID:
VEG52799
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Position
1:complement(339933..341711)
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AA seq
592 aa
AA seq
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MSTAPSVATLQDAAVQYARTSTWVPQGATLTLRPGTTTLLLGPSGCGKSTLTRLLPGLVP
HCLPSAYRGSARVGGQEVADAEVSHLASTVAVVMQDPDAQIVTTSVLDEVCYALENLCVP
AADIEARARRALADVGLSGREATSPWELSGGQRQRLVLACALAQEPALLVLDEPTANLDP
SATRAFYRLLPGVHARGAAVLVVEHDLDDVIEHVSHVIALGPDGSTLASGPVRRVMARHA
RALARAGVRLPSATALGLRLRDAGCTGPDDVDHDRPETAEKAPLTLADGARLLAAARLPQ
GSPPVAVTEDDRAPSGAPQAGPPAPTAPPALEVRDLDVPRGRRSRRRPVLTGVSLTLGPG
QVLAVTGANGSGKTTLLRALAGLEPWTGGSVRVAGRERRPGRPGHAVTLVAQNPENQFLE
RTVADELAHGLRLAGADEQEVRRSVSERLERFGLVEQAGSSPFLLSGGQQRRLSVASVLG
RHRDLICLDEPTFGQDRSSCEALMALLRSIADEGTAVVLTTHDMELVAGHADRVLVLADG
AVLTQGGPAQVLTDTALLERAGLTPPPLARMRALAVATGAPVPPFTRWEDLP
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacggctccctccgtcgccacgctccaggacgccgccgtccagtacgcccgcacc
agcacctgggtcccgcagggtgccaccctcaccctgcgcccgggtacgacgacgctcctg
ctgggcccctccggctgcggcaagtccactctcacccggctcctaccagggctcgtgccc
cactgcctgccctccgcctaccgcggctcggcgagggtcggcggacaggaggtcgccgac
gccgaggtctcccacctggccagcaccgtcgccgtcgtcatgcaggaccccgacgcccag
atcgtcaccaccagtgtcctcgacgaggtctgctacgccctggagaacctgtgcgtgccg
gccgccgacatcgaggcgcgcgcacgtcgggcgctggccgacgtcggcctgtccggccgg
gaggcgacgagcccctgggagctgtccggcgggcagcgccagcgcctggtcctggcctgc
gccctggcgcaggaaccggctctgctggtcctggacgagcccaccgccaacctcgacccg
tccgccacccgcgccttctaccggctgctgccgggggtccacgcccgcggggcggccgtg
ctcgtcgtcgagcacgacctcgacgacgtcatcgagcacgtcagccacgtcatcgccctc
ggccccgacggctccaccctcgcctccggccccgtccgccgggtcatggcccgccacgcg
cgtgcgctcgcccgggccggggtgcgactgccctccgcgaccgcgctggggctgcgcctg
cgcgacgccggctgcaccgggcccgacgacgtcgaccacgaccggcccgaaaccgcggag
aaggccccgctcacgctggccgacggcgcccgcctgctcgccgcagcccgtctgccccag
ggctcaccgcccgttgccgtcacggaggacgaccgcgcaccgtcgggcgccccgcaggcc
gggccgcccgccccgaccgcgcccccggcgctcgaggtgcgcgacctcgacgttccccgc
gggcgcaggagtcgccgtcgccccgtcctcaccggggtgagcctcaccctcggccccggc
caggtactcgccgtcaccggggccaacggctcgggcaagacgacccttctgcgcgccctc
gccgggctcgagccctggaccggcggcagcgtccgcgtcgccggccgcgagcgccgtccc
ggccgtcccggccacgcggtcaccctcgtcgcccagaaccccgagaaccagttcctcgag
cgcaccgtggccgacgagctcgcccacggcctgcgactggccggtgccgacgagcaggag
gtgcgtcggtccgtctcggagcgcctggagcgcttcgggctggtcgagcaggcgggctcc
agccccttcctcctgtccgggggccagcagcgccgcctgtcggtcgcctccgtcctggga
cgccaccgcgacctcatctgcctcgacgagccgaccttcggccaggaccggtccagctgc
gaggccctcatggcgctgctgcgctccatcgcggacgagggcaccgccgtcgtgctcacc
acccacgacatggagctcgtcgccggtcacgccgaccgcgtcctcgtcctggccgacggc
gcggtcctcacccagggcggccctgcgcaggtcctcaccgacacggcactgctggagcgg
gccgggctcacgcccccgccgctggcgcgcatgcgtgcgctcgccgtcgccacgggcgcg
cccgtgcccccgttcacccggtgggaggacctgccgtga
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