KEGG   Anneissia japonica (feather star): 117109394
Entry
117109394         CDS       T08613                                 
Name
(RefSeq) DNA ligase 3-like isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
ajc  Anneissia japonica (feather star)
Pathway
ajc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ajc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117109394
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ajc03400]
    117109394
Enzymes [BR:ajc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     117109394
DNA repair and recombination proteins [BR:ajc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     117109394
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP zf-CCHH DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme BRCT Itf52_C Synaptonemal_3
Other DBs
NCBI-GeneID: 117109394
NCBI-ProteinID: XP_033107610
EnsemblRapid: LOC117109394
LinkDB
Position
Unknown
AA seq 1047 aa
MLLITSALNWIACRRSITALQHLHCRCCFIRPAAYTDHHITKHVQHGNLLNGTYTSHNQF
ILPVVKKTGSFDYLISDISSRINSIEMASTRYSVDYAKLGTSKCKRCKQGIEKKSPRIAK
LVPNPFSDDGSDMKQYHHINCIFESFLKARANTKKIESTSDLEGFLDLEDQEKDIIKQHI
KELCVKLSAKSPGKKKVVQSKLTSDMKVVSPTKNPVVKGTGGGGPSSSVGAPPSSPSGSG
SGSSNLYGSGGKNHPDNSFREYRKLCAKIADESSYLGKTKLVSNYLKNGSTGDGFQGNTY
ILLKLLLPGVVKRVYHINSKQIAKLFSQILGTNLEEMVEDLDLGDPSETVRKFFVQSPCV
TPATKSLLTLQDVDETLDEMSKLTRELDQQRELTKMTNRCTANDLKMFIRLVMHDIRINA
GAKHILDGLAPNAHEAFKASRNLKDLVERVQQNKKASNGVPGMTKKLTIQASLMTPVLPM
LAEACRSVEQAFRKCPNGIYAEIKYDGERVQVHKSGDTFQYFSRSLKQVLPHKVAHIKDY
LPLACPHGDSIILDSEILLVDNHGNILPFGTLGVHKKSAFADATVCLFIFDCLYFNGQSL
MDKPLQERRKILEKNLTPIRGRIMFSEMHELTKHEQLAGLLTEVFQEGLEGLVLKDSQSK
YEPGMRHWLKVKKDYLNEGAMADSADLILLGGYYGTGNKGGIMSVFLLGVYDQHADRFLT
VTKCGGIDDKMLEKLNAELPMKKISKDMSKVPSWLRVHKNLVPDFVIKDPKASPVWEIIG
AEFSQSETHTGGGISIRFPRVARMRDDKDWRSATSLAQLRELYKTSKDTSDIPSLVKGKK
DEGGRLKSRMKRGKDNSDEGASSSGRSTPISKPTAQGGENNEKTPKKGTPVKQEKATPKK
MDITPKKTPKKRHLDEEPANTPSPKKGKLMCQYGAACYQTNPSHRSKFSHPSPNGHSSPI
LKGLLDIFSGVKVCIDRSHPNIKSLRRYIIAYNGDVMDDFNKANATHHIKESAKQNDSSL
KCVSEKWIWECIRQRKLVDEDAFLPSE
NT seq 3144 nt   +upstreamnt  +downstreamnt
atgttgttaatcacatcggctttgaattggattgcatgtagaagaagtatcacagcttta
cagcatctacattgccgttgttgcttcattagaccagcagcgtatacagatcaccacata
acgaaacacgtgcaacatggtaatcttttaaacggaacgtatacatcgcataaccaattc
atcctaccagtagtgaaaaaaactggctctttcgattacttgatttctgatattagcagc
cgaataaacagcattgaaatggcgagtacaaggtactctgtcgactatgccaagctcggg
acgtcaaagtgcaagaggtgtaagcagggcatcgagaagaagagcccacgaattgcaaag
ctcgtcccgaacccctttagcgatgatggttctgatatgaagcagtatcatcatattaat
tgcatttttgagtcgtttctaaaagcacgtgcaaatacaaaaaagatagaatcaacgtca
gatctagaagggtttctggatttggaggatcaagaaaaggatataatcaagcagcatatt
aaagaattgtgtgtgaaacttagtgcaaaatcgcctggtaagaaaaaggttgttcaatcg
aagttgacatctgatatgaaagtagtttcaccgactaagaacccagtcgtcaagggcaca
ggtggaggtggtccatcatcatctgttggtgctcctccttcatcaccaagtggttctggt
tccggatcatctaatctctacggctccggaggtaagaaccacccagataactcatttcga
gaataccgcaagttgtgtgccaaaattgctgatgagtcaagttatctcggaaaaactaaa
cttgtctccaattatctgaagaatggttcaactggagatggctttcagggcaatacgtat
attctgttgaagctgctgttgccaggcgtggtcaagcgggtgtaccatatcaacagtaaa
cagatagctaagctctttagtcagattttaggaacaaatcttgaagaaatggtggaagat
ctcgacctgggcgatccatcagagacagttcgcaaatttttcgtgcagagcccatgtgtc
actccagcaaccaagagtctactgacgttgcaagatgttgatgaaacacttgatgaaatg
tcaaaactgactcgtgagttggatcagcagagggagctcacaaaaatgacaaaccgctgt
actgccaacgatctcaaaatgttcatacgcttagtcatgcatgacattcgcattaacgct
ggagcaaagcacatccttgatggcctggccccaaatgcccatgaggcattcaaggcatca
cgtaatttgaaggatctcgtggaaagggttcaacagaataaaaaagcatccaatggagta
cctggaatgaccaagaaactgaccatccaagctagtcttatgacgccagtcttacccatg
ctggccgaggcatgccgctctgttgagcaagcatttcgaaaatgcccaaatggaatctac
gcagaaattaaatacgacggcgagcgggttcaggtacacaaaagtggcgacacatttcaa
tactttagtcggagtctcaaacaggtactccctcacaaggtggcgcatatcaaagactac
cttccacttgcttgtcctcacggagatagcattatcttagacagtgagattcttcttgtt
gataaccatggcaacatccttcctttcgggactcttggagttcacaagaaaagtgctttc
gcagatgccacagtctgtttgttcatctttgactgcctttacttcaacggccaaagtctc
atggataaacctttacaggaaagaagaaagattctagagaagaatctcacaccgattcgc
ggaaggattatgttctcagagatgcatgaactgacgaaacatgaacaacttgcaggactg
ttaactgaagtgttccaagaaggattagaaggacttgtgttaaaggattcgcagagtaag
tacgagccagggatgcggcattggttaaaggttaagaaagattacctcaatgagggtgct
atggcagattctgctgatctcattctcctcggtggctattatggaacaggaaataaaggt
ggaattatgtccgttttcttgctcggtgtctatgaccagcatgcggatcggttcctcact
gtcaccaaatgtggcggaattgacgacaagatgttagagaaactaaacgcagaattgcca
atgaagaaaatcagtaaagatatgtcgaaagtcccttcgtggttacgagttcacaaaaat
ctcgtcccagattttgtaatcaaggatccaaaggcctcccctgtgtgggaaatcattgga
gctgagttctcgcagtcagaaacacatacaggagggggaatctcaattcgttttccgcgt
gtcgcccggatgagggatgataaggactggcggtcagccactagtctcgctcaactacgg
gaattgtataaaacatccaaagacacttctgacatcccaagcctggtgaaaggtaagaaa
gacgagggagggaggttaaagtcaaggatgaagcgtgggaaagacaactcagatgagggg
gcaagcagctccggtcgatccactcccatttcaaaacctacagcccagggtggggaaaat
aatgagaaaactccaaagaagggaactccagtgaaacaggaaaaagcaactccaaagaag
atggatataacaccaaaaaagactccaaaaaaacgtcacttggacgaagagccagcaaat
acacccagtccgaaaaagggcaaactaatgtgccaatatggtgcagcttgttatcaaaca
aatccaagccacaggtcaaagttcagccacccaagtccaaatggacacagctcaccaata
ctgaagggccttcttgacatcttcagtggggtcaaagtttgcattgaccgatcacatcca
aatattaagtccttacgacgttacatcattgcatacaatggtgatgtcatggatgatttc
aacaaagctaatgcaactcatcacattaaagaaagtgccaaacagaatgattcttctttg
aagtgtgtctcagaaaaatggatttgggaatgtatccggcaacgaaagctggttgatgag
gatgcttttctaccttcagagtag

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