Anneissia japonica (feather star): 117120394
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Entry
117120394 CDS
T08613
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117120394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajc03041
]
117120394
Enzymes [BR:
ajc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117120394
Spliceosome [BR:
ajc03041
]
Complex A
U2 snRNP components
U2 related factors
117120394
Complex B
117120394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
DUF4830
Motif
Other DBs
NCBI-GeneID:
117120394
NCBI-ProteinID:
XP_033121324
EnsemblRapid:
LOC117120394
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MARENRQYRKRSRSNSSDSDHDKKTRKRSRSRSKGRSRSRERERKRSRSRERNRDRARER
DRSRERNRSRERNRSRERDRSRRSHSRERQRRRRSRSRERVRRRRSRSRSKDRYQRGRSY
ERSDRRQRSRSPRRERRSRSRNRDHERRSPSPSKDRSRSRKSRSKSKEKSQEKEKIVNRK
EDVVKEEPSIVKEEKEEDKGMMLEQKRLEEIIQKRKERIEKWRFEQKKSADVKKDILNLI
PSSKKKWSLEDDTDDEEEEEDDQQQSEGNKEGDEKEEEKVMEKKKEEKDNDDDDNDDGDI
DPLDAFMQGVQDEVRKINNSDRNKKGLPDMEEIQENVPLGKVSIVTGVAKKIQSQPVKIL
NKGELMINDQDAMEYSSEEEETSLADTMKNALELKKKKELAAVDHSTITYQPFRKNFYIE
VPQLAKMTVEEVEEMRADLESIKIRGKNVPKPIKEWVQCGVSKKILDVLKKNKYEKPTPI
QAQAIPCIMSGRDLIGIAKTGSGKTMAFLIPMMRHILDQDPLEADDGPISMILTPTRELA
MQIYKECKKFTRSHGLKVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVT
NLRRCTYLVLDEADRMFDMGFEPQVMKIVDNIRPDRQTVLFSATFPRQMEALARRILTKP
VEVQVGGRSIVCSDVEQHLIILEEEEQKFLKLLELLGIYQEKGSVLVFVERQESADRLLK
DLMKSSYSCVSLHGGIDQYDRDSIIEDFKAANVRLMVATSVAARGLDVKHLILVVNYDCP
NHYEDYVHRCGRTGRAGRKGYAYTFISPDQAKFAGDVIKAFEVSGQKVPNELNEIWKQYV
EDQKASGKQIQKNSGFSGKGFKFDETERELANEKKKLQKASYGLQDSDEEELGLDIDEKI
ETMFAAKKRVKDISAAEAAIGISKTVTQDPSGPVSNVNLEKAKRLAERINRNLEGDRHNV
MQQATQAVMDGRTIAPPTVSAKLIAEQLAGKLNAKLNYTPKVEEEVVEEQKETCKKYEEE
LQINDFPQTARWKVTSKENLAQIQDYSDAGITIRGTFFPPGKEPKDGERKLYLAIESVSE
LAVQKAKAEIIRLIKDELIRLQNSYQPTNKGRYKVL
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcaagggaaaacagacagtaccgaaaacgttcgcggtcaaacagcagtgattctgat
catgataaaaagaccagaaaacgctcacgttctcgaagtaaagggcgttctagaagccgt
gaaagagaaagaaagcgctctcgaagtagagaaagaaatcgtgatagagctagagaacgt
gatagatctagggaacgtaatagatctagagaacgtaatagatcgagggagcgtgataga
tctagaagatcacactcacgtgagaggcaaagaaggagacgttcgaggagtagagaaaga
gttagaagaaggcgatcacgatcacgaagcaaagaccgatatcaaaggggtcggagttac
gaaagaagtgatagaagacagcggtcaagatcccctcgacgtgaacgacgttcaaggagc
cgcaatcgtgatcatgagaggagatcaccatctccaagtaaggacaggagtcgcagtcgc
aagtctcgttcaaagagcaaagagaaatcacaagagaaagagaagattgttaatagaaag
gaggatgtagtgaaagaggagccatctattgtaaaagaagaaaaagaagaagataaagga
atgatgttggagcaaaagcgactggaggagataattcaaaaacggaaggagagaattgaa
aaatggcggtttgaacagaagaaatcagcagatgttaaaaaggacattctgaatttaatt
ccatcttcaaagaagaaatggagtttggaggatgatacagatgatgaagaggaggaagag
gatgatcaacaacagagtgaaggaaacaaggaaggagacgagaaggaagaagagaaggta
atggaaaaaaagaaagaagaaaaagacaatgatgatgatgataatgatgatggtgatatt
gatccattagatgcatttatgcagggagtgcaggatgaagtgaggaagattaataattct
gatcgaaataagaaaggtctgccggacatggaggagatacaggaaaatgtgccacttggc
aaagttagcattgtaacaggagttgccaaaaagatacagtcacaaccggttaaaatactc
aacaagggagaacttatgataaatgatcaagacgctatggaatactcttcagaagaagaa
gaaaccagtttagcagacacaatgaagaatgcattggaacttaaaaaaaagaaagaacta
gctgcagttgaccatagcacaattacataccaaccattccgcaagaacttctacattgaa
gtacctcagttggcaaagatgactgtggaagaagttgaagagatgcgtgcagatttggaa
tccattaaaatccgtggaaaaaacgtaccaaagccaattaaagagtgggtgcagtgtggc
gtttcaaaaaaaatacttgatgttctgaaaaagaataagtatgagaagccaacaccaatc
caagcacaagccattccatgcattatgtctggaagggatttgattggaatcgctaagact
ggtagcggaaagaccatggcattcttgattcctatgatgcggcacatccttgatcaagat
ccactggaagccgatgatggccctatttcaatgattttgacgccgacacgcgagcttgca
atgcagatttacaaagaatgcaagaagttcacacggtctcatggcttaaaagtggtttgc
gtgtatggcggcacaggcattagtgagcagattgctgaactgaaacgtggcgctgagatt
attgtgtgtacccctggaagaatgattgatatgttggcagccaacaatggtcgagttaca
aatctaagaagatgtacctaccttgtcctcgatgaagctgataggatgtttgatatgggc
tttgaaccgcaggtgatgaaaatagttgacaacattcgtccagatcgccagactgtcctc
ttctcagctacatttcctcgtcagatggaggcgctagccagaagaatattaactaagcca
gttgaagtacaggttggaggacggagtattgtttgctcagatgtagagcaacatttgatt
attctggaggaagaagaacagaagtttttgaagctgctggaacttctaggcatctaccaa
gagaaaggcagtgtcctggtgtttgtagaaagacaggaatctgcagacaggctgctgaag
gatctcatgaaatcttcatactcatgtgtctctcttcatggtggtattgaccagtatgat
cgcgactcaattattgaggattttaaagcagctaatgtgaggctaatggttgccacatca
gtggctgctcgaggtctagatgtaaagcatttgatcctagtggttaactatgactgccca
aaccactatgaagattatgtacacagatgcgggaggacaggtcgagctggtaggaagggt
tatgcttacaccttcatatccccagaccaagcaaagtttgcaggtgatgttatcaaagca
tttgaagtcagtggccagaaggttccaaatgaactcaatgaaatttggaaacaatatgtt
gaagatcagaaagcaagtggtaagcaaattcaaaagaatagtggattcagtggtaaaggc
tttaagttcgatgaaacagaaagagaacttgcaaacgaaaagaaaaaactacagaaggcg
tcgtatggcttacaagattcagatgaagaagagttgggactggatattgatgagaaaatt
gagacaatgtttgcagccaagaaacgagtgaaggacatttcagccgcagaagccgctatt
ggtatttcaaagactgtcacacaagatccatcaggtcctgtaagcaatgttaaccttgaa
aaggccaagcgattggctgagaggattaatcgtaacttagagggcgatagacacaatgta
atgcaacaggcaactcaagcggttatggacggcaggactattgcacctcctacagtctcg
gctaagttgattgcagaacagttagcaggaaaattgaatgccaagctgaattatacccca
aaggttgaggaggaggttgtagaagaacaaaaagaaacatgcaaaaaatatgaagaggaa
ttacagatcaatgatttcccacagaccgcaaggtggaaggtcacatcgaaagaaaatctt
gcgcaaattcaggactacagtgatgcaggaattacaattcgaggaacattttttccacca
ggaaaagaaccaaaagatggtgaaaggaagctttaccttgctattgaaagtgtatctgag
ttggctgtacaaaaagcaaaagcagaaattattcggcttattaaggacgagcttattcgt
ttgcaaaattcttatcaaccgacaaacaaaggtcgttacaaagtgctttaa
DBGET
integrated database retrieval system
