Histoplasma mississippiense: HCAG_03376
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Entry
HCAG_03376 CDS
T02229
Name
(RefSeq) similar to chromodomain helicase Chd1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
aje
Histoplasma mississippiense
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_03376
03036 Chromosome and associated proteins [BR:
aje03036
]
HCAG_03376
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
HCAG_03376
Chromosome and associated proteins [BR:
aje03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
HCAG_03376
SLIK complex
HCAG_03376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
CHD1-like_C
Chromo
Cdh1_DBD_1
ResIII
HDA2-3
DEAD
CHDCT2
AAA_22
Motif
Other DBs
NCBI-GeneID:
5448331
NCBI-ProteinID:
XP_001541279
LinkDB
All DBs
AA seq
1552 aa
AA seq
DB search
MDLSSMVLPSASMTSTLPNGHQSPVTNDVHATDENPSIPTFDNVSDLAETTADEQDPSDE
DADHDPSEDAESDAAEEFNAEMSSDSSDNEDDVDGHASPAAEHLIGEDEGYSAAEDASDA
PPASISGNSSAHNLKRGTKRKSPIIDDDFIRNNPSLYGLRRSGRARSIRQNVQTTSDSDS
EAVAPPSKRRRRTPNRPSKQPSLSQSIDSTSNSDGDEYHGSRNRTSKTKRRRMAQSDNLI
PTHAEIRFSTRRANRVSNYNEDDDDDEFEDESEMMTPGDWVTAVDDTTPAIDVVLNHRFK
EGVDLTRSGLSRDDFEFYIKWQGKSHYHATWETVESLASCRSVRRLDNYVRKTLSLEIQY
ARDPEIIPEEKEKWNLDRERDVDAIEDYKKAERVIGSREIDGATEYYVKWKRLFYDCCTW
EPAPLVSEIAQREIDRYLDRCSHPPISSKAESSPSTRAPFEPIHGTPSFVQNGELKEFQV
KGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRHQQGPFIVVVPLSTMPSWA
ETFDNWTPDLNYVVYNGNETSRNIIKEYELLIDGNIKRPKFHVLLTTYEYVLVDAAFLSQ
IKWQFMAVDEAHRLKNRESQLYAKLVEFKSPSRLLITGTPVQNNLGELSALMDFLNPGLI
QIDDDMDLGCEAASVKLAELTKSIQPYMLRRTKSKVESDLPPKSEKIIRVELSDIQLEYY
KNILTKNYAALNQGGKGQKQSLLNIMMELKKASNHPFMFPNAESRILEGKTGREEMMRAL
ITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPR
RLSIEHFNAPESSDFAFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQ
TRPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDKEATELKDKMARAGHQISEP
TSSDDISRILKRRGQRMFEQSGNQKKLEELDIDSVLANAEEHKTEQAEGMEADGGEEFLK
AFEFVDVKVDELTWDEIIPKEELEQIKAQEELRAHEQFLAQEIERSQPRKRKEPLDGRQE
RQAKRRARAQVNINADDVSDAPPPPDPSRPLSEKEYRHLIRAYLRYGDINDRQDDLIREA
RLIGRDIDVVKAALGEIVEKAHALLKEENNRLNALEREGKSFTKKERKAILFDHQGVKRL
NAETIVERPNEMRILRKATADVADPQSFRVPEATKGADYSCAWGAREDGMLCVGIARHGY
GAWAQIRDDPDLALADKFFLEEHRVDRKAERMNGGGKGTTKSPGAVHLVRRADYLLSVLK
DKISNGASAIAKRAVENHHRNNKKNSLHSRGHVNGSVSGSPSPSLPRKARDLDKSRSRVH
KSRDSADLSNNPTGDNRPNHSSSKHRRLQDHRRDEKDRDRSSKARIKVRGEEKDRHRRNN
DSAGTSMDNNNDAILKVIFKPIQAHLKQVSQVTKENIPSKSDRAGELRRLLLLIGRFIRS
TLDGNEARASLEERLWGFAATYWPNKATPAAALHNMFDRLMEVEKTESTQQR
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggatctcagtagcatggtgctcccttccgcctcgatgacatctaccctgccaaatggc
caccagtcccccgtcacaaatgatgttcatgccacagatgagaatccatctataccgacc
ttcgacaacgtgagcgacttggctgaaacaactgccgacgagcaagatccctccgacgaa
gatgcagatcatgacccgagcgaggatgcggagtcggacgccgcggaggagtttaatgcg
gagatgagttcggactcctcagacaatgaggatgatgtggatggacatgcttctccagct
gctgaacaccttattggtgaggatgaaggctattcggctgctgaagacgcttccgacgca
cctccagcgtctatttctggtaactcatcggcccacaacctgaagaggggcactaaacga
aaatctcccattatcgatgatgactttataagaaataaccccagcctctacggcttacgt
cgaagtggtcgtgcaagatccattcgtcaaaatgtccagactacatccgattctgactct
gaagctgtcgcccccccttcaaagcggaggcgtcgtacaccaaatcgaccctcaaaacaa
ccttcgctttctcagtcaattgattctacctccaattctgacggtgacgaatatcacgga
tcgcgcaatagaacctcaaaaacaaaacgtcgacggatggcgcagtcggataacctcata
cctacccatgccgaaattcgcttttcaactagacgtgcaaatagagtatctaattacaat
gaggatgatgacgatgatgaatttgaagatgaatcggaaatgatgacgccgggggattgg
gtgactgcagtcgatgatacaacgccagccattgatgtagtgctcaaccataggtttaag
gagggcgttgacctcacacggagcggccttagtcgagacgattttgagttctacattaaa
tggcaagggaaatcccattatcacgcgacatgggaaacggtggaatcccttgccagctgt
aggagtgtgcgtcgcttagataactacgtacgcaagaccctgtccttagaaatacaatat
gcaagggacccagaaatcattcccgaggaaaaggagaaatggaacctcgaccgggaacgt
gatgtggatgccatagaagattataaaaaggcagagcgtgttatcggctctcgcgagatt
gacggtgcaacagagtactatgtcaaatggaaacggcttttctatgattgctgtacatgg
gaacccgcgcccctagtcagcgagatcgctcagcgggagatcgatcgctatctcgaccgt
tgctcccacccgcccatttctagtaaagccgaatcaagcccctcaactcgagccccattc
gagcccatccacggcaccccgagctttgttcagaacggtgaactcaaggaattccaagtg
aaaggagttaacttcatggcttataactgggttcgtggtcgaaatgtggttcttgcagac
gagatgggtttagggaagaccgtccaaacggtggcctttatcaattggttgcggcatgtc
aggcatcaacaaggtcccttcatcgtcgttgtgccgctctcaacaatgccttcttgggca
gaaacatttgacaattggacaccagacttgaactacgtggtttacaatggcaacgaaaca
tctcgcaacattataaaggaatatgaattattgattgatgggaatattaaacgacctaaa
ttccatgtccttctcactacttacgaatatgttcttgtggacgccgccttcctaagtcaa
atcaaatggcaatttatggccgtcgatgaagctcatcggttgaaaaatcgggagtcgcaa
ctatatgctaagcttgttgaattcaaatctcctagtcgactactaattacgggaacgcct
gtgcagaataacctaggcgaactctctgctctaatggacttcctaaaccctgggctgata
caaattgacgatgacatggatctaggttgtgaagcggccagtgtaaaattagcggaactt
accaaatctatccagccttacatgcttcgacggaccaaatcgaaggtcgagtcggattta
cctcccaagtcggagaagatcattcgagtcgaattgtccgacatccaactagagtactac
aaaaacatactgacgaaaaattacgctgccctcaaccaaggcggcaaaggacagaagcaa
tcccttcttaatatcatgatggagctcaagaaggctagcaaccatcctttcatgtttccc
aacgctgaatctcgcattttggaggggaaaacgggccgtgaagaaatgatgcgtgccctc
ataacgagcagcggaaagatgatgttgctggatcaactattggccaaactgaaaaaggac
ggtcatcgggttttaattttcagccaaatggttcgcatgcttgacatcctagctgactat
atggatgtccgtggctatgcctaccaacgactagatggaacgatcgctgccggccctcga
cgtctgtctattgaacattttaatgcccccgagagcagtgattttgcatttcttctctcc
actcgtgcgggaggtttggggattaacctcatgactgctgatactgttgtcctttttgat
tctgactggaaccctcaggccgatcttcaagcaatggcacgcgcacatcgcattggacaa
actcggcctgtgagcgtttatcgacttgtatctaaagatactgttgaagaggaggttctc
gaaagagcaagaaataagctgcttctcgaatttattaccatccaacgaggagttactgac
aaggaagcaactgagctcaaagacaagatggcgcgtgcaggccaccagatcagtgaacca
acctcttccgacgatatatcccgcattctaaagcgacgcggccagcgcatgttcgaacaa
tctgggaaccagaagaagttagaagaattagatattgactctgtcctggcgaatgctgaa
gagcacaaaaccgaacaagccgaaggtatggaggcagatggtggagaggagtttctcaag
gcctttgagtttgtcgacgttaaggtggacgaacttacgtgggacgaaatcattccaaaa
gaggagctcgaacaaatcaaagcacaagaggaacttcgagcgcatgagcaattcttggct
caagagattgaacgaagtcagccgcgtaaacgaaaagagcccttggatgggcgacaggaa
cgccaagctaaaagacgagctcgggcacaggtcaatatcaacgctgacgatgtgtctgat
gcaccaccgccacctgacccgagcaggcccctcagcgagaaggaatatagacatctcatc
cgcgcgtatcttagatatggcgacatcaatgatcggcaagatgatctaatcagggaagca
cggctcattggccgagatatcgatgttgtgaaagctgcgttgggcgagatagtcgagaag
gcccatgccctattgaaagaggaaaataaccgcctcaatgcccttgagcgtgaaggcaaa
agcttcaccaagaaagaacggaaagccatccttttcgaccatcagggcgttaaacggctt
aatgccgagaccatcgttgagaggccaaatgaaatgcgaattctgaggaaggctaccgcg
gatgtagccgacccccagagctttcgcgttcctgaagctacgaagggcgctgactattcc
tgcgcctggggtgcacgtgaagatggtatgctctgtgtcggaatagcccgccatggctat
ggtgcctgggcacagatccgcgatgaccccgatcttgcgcttgctgacaagtttttcctc
gaggagcatcgggttgaccggaaagcggagcgcatgaatggtggtgggaagggtacgaca
aaatctcccggagctgtccacctggtccgtcgcgcggactatctcttgtcggtcttgaag
gataagataagcaacggtgctagcgctattgcgaagagagccgtggagaaccatcatcgc
aataacaaaaagaatagcctccattccagaggccatgtgaacggtagtgtctcgggatcc
ccttcgccatccctccctcgcaaagcccgcgacttggacaaatcgcgatctcgtgtccac
aaatctcgagacagcgccgatctttcgaacaaccctacaggtgacaacaggcccaaccac
agttctagcaaacatcgacgtctgcaggatcaccggcgagacgaaaaggatcgcgatcgt
tccagcaaagcccgaatcaaggtccgcggggaggagaaagatcgtcaccgtcgcaacaac
gacagcgctggaaccagtatggacaacaataacgatgcaatactcaaggttattttcaag
cccatccaagcgcatctcaagcaagtatctcaggtcaccaaagaaaacatcccaagcaag
tcggatcgggcgggcgaattgcgacggttgctgcttctcattggccggtttattcgaagc
actttggatgggaacgaagcacgagcttcgctagaagagcggctgtggggatttgctgcg
acctattggcccaacaaggccacaccagcagctgcgctgcataacatgttcgatcgtctt
atggaggttgagaagactgaatcgacccaacagcgatga
DBGET
integrated database retrieval system
