Histoplasma mississippiense: HCAG_04221
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Entry
HCAG_04221 CDS
T02229
Name
(RefSeq) ATP-dependent RNA helicase ded1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
aje
Histoplasma mississippiense
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_04221
03041 Spliceosome [BR:
aje03041
]
HCAG_04221
03036 Chromosome and associated proteins [BR:
aje03036
]
HCAG_04221
Enzymes [BR:
aje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HCAG_04221
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
HCAG_04221
mRNA cycle factors
Common to processing body (P body) and stress granule
HCAG_04221
Spliceosome [BR:
aje03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
HCAG_04221
Chromosome and associated proteins [BR:
aje03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
HCAG_04221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-GeneID:
5446979
NCBI-ProteinID:
XP_001540381
LinkDB
All DBs
AA seq
694 aa
AA seq
DB search
MANGLNIGSLKIDDSQRPAGPNTTGRAAYIPPHLRGSVARPPMGLDGSGPAQAVPGLNAS
TWAPNNAGPHPGAGHNWANAQNFTPRDRPPGAPAGPPSMNGNTTWGNAPPRQFNANDYGK
PGPNSFRGSSYGGGRSGGTRGIGGHGYWDENGKHAQGPENKRLERELFGEADDPTKQHTG
INFSNYDSIPVEASGHDVPESITAFTNPPLHEHLLSNIVLARYTVPTPVQKYSIPIVMGG
RDLMACAQTGSGKTGGFLFPILSQSLHTRGPEAEAARGLGRQQKAYPTALILGPTRELVS
QIYDEARKFCYRTALHPRVVYGGAEMGNQLRQLDQGCNVLVATPGRLVDMMERGRISLAH
IQYLVLDEADRMLDMGFEPQIRRIVQGSDMPDKHMRQTLMFSATFPPDIQKLAEEFLKDH
IFLSVGRVGSTSENITQRIVECESDKDKDSALLDILCSDSTGLTLVFVETKRQADMLSDF
LLDHRLPATAIHGDRTQRERERALELFRTGRCPILVATAVAARGLDIPNVTHVINYDLPN
EIDDYVHRIGRTGRAGNTGISTAFFSRSKNFKIARSLVDLLKDANQEVPDFLEKLGRQGN
YYGSSGGGRGGRGGGRGRGGSSSTRDIRRTGGGYGGGGMGGSRPAYGGGYGDSGAGGPYG
YGGGSGGYGGGYGGGYGGGGYGNPSGPTGPSSWW
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacggcttgaatattggttctctcaagatcgatgattctcagcgccctgctggg
cccaacaccactggtcgagctgcttatatccctccccatttacgcggtagtgtcgctcgt
cctcccatgggccttgatggaagcgggcctgctcaagctgtcccgggcttgaacgcgagc
acatgggctccgaacaacgctggcccccatccaggtgctggtcataactgggcaaatgcc
caaaactttacaccccgtgatcgccctccaggagctcctgctggacccccatccatgaac
ggcaatactacttgggggaatgctcctccccgtcagtttaacgcaaatgactacggaaaa
ccgggtcccaactcgttcagaggatcttcgtatggcggcggcagaagcggaggaacgcgc
ggaattggtggacatggatactgggacgaaaatggaaaacacgcacagggccctgagaac
aaacggctcgaacgcgagctttttggcgaggctgacgatcccactaaacaacacacaggc
atcaacttttcaaactatgacagtatccctgtcgaagctagtggccatgacgtgcctgag
tccattactgccttcacgaatccaccattgcatgaacacctgctttcgaatatcgtgcta
gcccgctatacagttcccacaccggttcagaaatattccatccccattgtcatgggtggt
cgggatctgatggcatgtgctcaaactggctccggaaagactggtggcttcctcttcccc
atcctctcacaaagcctccacacacgcggacccgaagcagaagctgccagaggattaggt
cgtcagcaaaaggcataccccactgccctgatcttaggacctacccgtgaacttgtttct
caaatctatgatgaagctcgcaagttctgttaccgcactgccctccatcctcgcgtcgtg
tacggaggagctgagatgggaaaccaactccgccaacttgaccagggctgcaatgtgctt
gttgccaccccgggacgtctcgtcgatatgatggagcgcggtcgtatctcgctggcccac
atccagtacttggtcttggatgaggctgaccgtatgttggacatgggtttcgaaccccag
atccgccgtatcgtgcaaggctccgatatgcctgataagcacatgcgccaaactctcatg
ttttccgccacgttccccccggatattcagaagttggcagaggaattcttgaaggatcac
atctttctttccgtcggtcgtgtgggctcaacttctgagaacatcacccagcgcattgtc
gagtgcgaatccgataaggacaaggattccgctctgctcgatatcctctgcagcgactct
acaggtctcaccctcgttttcgtggagaccaagcggcaagcagatatgctttcagacttt
ttgctcgatcaccgtctcccagctaccgctatccatggcgaccgcacacagcgagagcga
gagcgtgctcttgaactcttccgtacaggccgctgccctattcttgtcgccactgctgtc
gcagcccgtggccttgacatccctaacgtcacccacgtcatcaactacgacctcccgaac
gaaatcgatgactacgttcaccgcatcggtcgtaccggccgtgctggtaacaccggtatc
tccactgctttcttcagccgcagcaagaatttcaagattgcccgcagcctcgtcgacctg
ctcaaggacgctaaccaggaagtgcccgacttcctagaaaaactcggccgtcaaggtaac
tactacggctccagcggtggtggccgcggtggtcgcggtggtggccgtggccgtggggga
tcaagctcgacccgtgacattcgtcgcactggcggtggctatggcggtggcggcatgggt
ggcagccgtcctgcttacgggggcgggtatggtgattccggtgctggtggtccctatggc
tacggcggaggttctggtggttatggaggcggctacggtggtggatatggaggaggcggc
tatggtaacccatcaggccccaccggtccatcttcctggtggtag
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