Histoplasma mississippiense: HCAG_06934
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Entry
HCAG_06934 CDS
T02229
Name
(RefSeq) suppressor of stem-loop protein 1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
aje
Histoplasma mississippiense
Pathway
aje03022
Basal transcription factors
aje03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HCAG_06934
09124 Replication and repair
03420 Nucleotide excision repair
HCAG_06934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_06934
03400 DNA repair and recombination proteins [BR:
aje03400
]
HCAG_06934
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HCAG_06934
DNA repair and recombination proteins [BR:
aje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HCAG_06934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
YL1
Motif
Other DBs
NCBI-GeneID:
5445400
NCBI-ProteinID:
XP_001539329
LinkDB
All DBs
AA seq
506 aa
AA seq
DB search
MSDSDDEYVAHASDHDLDDVLDEDDDDDDDELDARPSASGPRRRRPAAAPAAATTRSSRD
ARKKQKGRGGAEWEVSRTWETLVESADGTISATVEDLLGAGKRKRLLRDTTPLQRGIIRH
LILVLDLSSAMAEKDLRPTRYLLTLRYAQEFVLEFFEQNPISQLGVLGMRDGLAVRISDM
SGNPTDHIMAIQALRPKDPKGTPSLQNALEMARGALFHTPTHGTREVLIIFGALLSSDPG
DIHQTITALVADKIRISIIGLAAQVAICRDLCARTNNGDDTVYGVALNEQHFRELFMDVT
APPATTVAPTSTPTAFSANGPKTTTTSTTTSSLLMMGFPSLTLTTTPTPSLCACHSKPSR
AGYLCCRCNAKVCTLPSSCPCCGLTLILSTHLARSYHHLFPLMNWVEVSWRRAARKRSAS
CFACGVGFPRMPKLVSGEPEETAKAAVGVGVSVSGRYECPVCECHFCIDCDVFAHEVVHN
CPGCQSGVVKQQRLNGNGVADEMDTG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcagacgatgaatacgtcgcccacgcttcggatcatgacctcgacgacgtc
ttagacgaggacgacgatgacgatgacgatgagctcgatgctcgcccctctgcctctggc
ccccggcgtcgtcgaccagcagcagcaccagcagcagcaacgactaggtcgtcgcgagac
gccaggaagaagcaaaagggccgtggtggtgctgagtgggaggtgtccaggacttgggag
acgctggttgaaagcgcggatggcaccatcagcgctactgtggaggatctgctgggggcc
gggaaaaggaaacgactactccgcgacaccaccccgctccaacgcggcatcatcagacat
ctcatcctggtcttagacctctcctctgccatggccgaaaaggacctccgtcccacccgc
tacctcctaaccctccgctatgcccaggagtttgtcctcgagttcttcgagcagaacccc
atctcccaactaggcgtgctgggcatgcgcgacggcttagctgtgcgcatcagcgacatg
agcggcaaccccaccgatcatatcatggctatccaggccctccgtcccaaggaccccaaa
ggcacgccatctctgcagaatgcgttagagatggcccgtggtgcgcttttccacacacca
acccatggcacacgcgaagtccttatcatcttcggcgccctactctcctctgaccctggc
gacatccaccaaaccataacagcgctagtcgcagacaaaatccgcatctctataatcgga
ctcgcagcgcaagtcgccatctgccgcgacctgtgcgcccgcacaaacaacggcgacgac
accgtctacggcgtcgccctgaacgaacagcatttccgcgaactattcatggatgtcaca
gccccccccgccacaactgtcgctcccacttccacacccacagctttctcggcaaatggc
cccaaaacaacaactactagcacgaccaccagctccctcctcatgatgggcttcccctct
ctaaccctcaccacaacgcctaccccaagcctctgcgcctgccactccaaaccctcgcgc
gccggctacctttgttgccgctgcaacgcaaaagtctgcaccctgccttcctcctgcccc
tgctgcgggctcaccctcatcctctccacccacctcgcccgctcctaccaccacctcttc
ccgctgatgaattgggtcgaggtgtcctggcgccgcgcggcgaggaagcgaagcgccagc
tgctttgcgtgtggtgttgggtttccgcggatgccgaagctggtttccggcgagccggag
gagactgccaaagccgccgtgggagttggcgttagcgttagtggccgatatgagtgtccg
gtttgcgagtgccatttctgtattgattgcgatgtatttgcgcatgaggttgtgcataat
tgcccggggtgtcagagtggggttgtgaagcaacagcgattgaatgggaatggagtagct
gatgagatggacaccggctag
DBGET
integrated database retrieval system
