KEGG   Histoplasma mississippiense: HCAG_07298
Entry
HCAG_07298        CDS       T02229                                 
Name
(RefSeq) similar to cdc17
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
aje  Histoplasma mississippiense
Pathway
aje03030  DNA replication
aje03410  Base excision repair
aje03420  Nucleotide excision repair
aje03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HCAG_07298
   03410 Base excision repair
    HCAG_07298
   03420 Nucleotide excision repair
    HCAG_07298
   03430 Mismatch repair
    HCAG_07298
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aje03032]
    HCAG_07298
   03400 DNA repair and recombination proteins [BR:aje03400]
    HCAG_07298
Enzymes [BR:aje01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HCAG_07298
    6.5.1.6  DNA ligase (ATP or NAD+)
     HCAG_07298
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     HCAG_07298
DNA replication proteins [BR:aje03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HCAG_07298
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HCAG_07298
DNA repair and recombination proteins [BR:aje03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HCAG_07298
   NER (nucleotide excision repair)
    Other NER factors
     HCAG_07298
   MMR (mismatch excision repair)
    Other MMR factors
     HCAG_07298
SSDB
Motif
Pfam: DNA_ligase_A_N DNA_ligase_A_M DNA_ligase_A_C
Other DBs
NCBI-GeneID: 5444156
NCBI-ProteinID: XP_001537876
LinkDB
AA seq 790 aa
MAQKGGGGAKQATLGKFFGANAGSASLPKKQATLAFSTSSGSREKRQNGSATQADEEEAL
VNGDKDVDMNNDAKKKEPKIDSRGSETPAAESRESDSDSAAEKSLSHSDSDFPDSKKLKR
EKSPMEDSDESDVQPVTKRRKRAPSNRETAGKKPSASQNQNKRTRSPNKAREKPVAEDKE
SSSAEQEDIISDNDDDLAEEKPKIAQKKRETVQQALKGSREDPYPDWKAGEPVPYAALCT
TFSLIEMTTKRLIILSHCSLFLRQVLRLTPKDLLPTVQLMLNKLAADYAGVELGIGESFI
MKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLAIAKT
QGHGSQEKKISAIKKLLSSADATLAGKGSKGIDITQNKGGPSEAKFIIRFLEGKLRLGLA
EKTVLVALAHAMVAHEVELQGKKAPSTEELGKGEAILKSKYPDILGKLENWVKQGTTSFV
LDCETVAWDTVNKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTVKMTLRE
RRARLHDAFTPIEGEFVFAQHGDTNDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPS
KRSRNWLKVKKDYLAGIGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNTSTQTFQTVCNI
GTGFSEALLEELHKSLSPLVIDCPKPFYDHSSVPKDQPDVWFEPKYVWEVKAADLTLSPR
YKAAADEFMGTSHGAGKGISLRFPRYIKSRDDKKPEEATATRQVAEMYRRQESVSKDTAG
KGGVDDDFEY
NT seq 2373 nt   +upstreamnt  +downstreamnt
atggcgcagaagggaggtggcggtgcgaaacaggctactttggggaagttcttcggtgcc
aacgcaggttctgcgtcgctccccaagaaacaggctactttagcattctcaactagctca
gggagcagagagaagcgacaaaatggatctgcaacgcaggcggatgaggaagaggcgcta
gtaaatggagataaggatgtcgatatgaataatgatgcgaagaaaaaggaaccaaagatt
gacagcagggggagcgaaactcctgctgccgaatccagggaatcagattcggatagtgca
gctgaaaaatcgctgagccatagcgacagtgacttccccgactcaaagaagctaaaacgg
gagaaaagtcccatggaggacagtgacgaatctgatgttcagccagtcacgaaaagacga
aaacgtgctccttcgaatagagagaccgctggcaagaaaccctcggcttcacagaatcaa
aataaacggacacgatctccgaataaggccagagaaaagcctgtggctgaagacaaggaa
tcctcgtccgctgaacaggaggatatcatttctgataacgatgatgatctggcagaggag
aagccgaaaattgctcagaagaagagagaaacggtccagcaggcattgaagggatctaga
gaggatccctatccagattggaaagctggagagcccgtgccatacgcggcgctctgcacg
accttctcccttattgaaatgactactaagcgattaattatattatctcactgctcccta
tttctccgccaagttcttcgtcttaccccaaaagaccttctcccaactgtccagctcatg
ctcaacaaattagccgccgattatgctggcgtcgaacttggaattggcgaatcattcatc
atgaaagccattggtgaatccaccggccgcagcctggcagttatcaaggctgaccagcat
gaaatcggcgaccttggccttgtggccgcgaaaagtcgttcaaatcagccaactatgttc
aagccgaaaccattgaccgtaaggggcgtgcacgaaggtcttcttgcaattgctaaaaca
cagggtcacggatctcaggaaaaaaagatttccgctatcaaaaagctcctgtcatcagct
gatgctactctggcaggaaagggatcgaaggggattgatatcacacaaaataaaggcggc
ccaagcgaagctaaatttatcattcgtttccttgagggtaaactacgacttggtcttgct
gaaaagaccgtgctcgtggcgctggcgcatgcgatggtggcccatgaggttgagctgcag
gggaaaaaggcacccagcaccgaagagttaggcaagggtgaagctattcttaaatcaaaa
tatccggatatcttgggcaaactagagaactgggttaagcaggggacaacaagttttgtg
ttggactgcgagaccgttgcatgggatacggtcaataagaaagttttgccatttcagcag
ctcatgacgaggaaacggaaggacgtgaaggctgaagatgtcaaggttaaagtctgtgtg
tttgcatttgacctgttgtttttaaatggagagcccactgtgaaaatgacactgcgagaa
cgaagggctcggttgcatgacgcgttcactccaattgaaggcgaatttgtattcgcccaa
cacggcgacactaacgatctcgacgagatccagacattacttgacgaaagtgtaaaagcg
tcgtgtgagggtttgatggtgaaaatgcttgataccgaagaaagcggatatgagcccagc
aaacgcagccgaaactggctcaaggttaagaaagattacctcgccggcatcggcgactct
ctcgacctcgtcgttctgggcgcctactacggccgcggcaaacgcacatctgtgtacggc
gcgttcctcctagccgcctacaacaccagcactcaaactttccaaacagtctgcaacata
ggtaccggattctccgaagcgctcctcgaagagctacacaagtccctatccccactcgtc
atcgactgtccgaaaccattttacgaccattcttccgtccccaaggaccagccggacgtc
tggttcgagccaaaatatgtttgggaggtgaaagcggcggatctgacgcttagtccgcgt
tacaaggccgcggcagatgagtttatggggactagtcatggcgctggaaagggcatttcg
ctgcgatttcctaggtatattaaaagccgggatgataagaagcctgaggaagcaacagca
acgaggcaagtggcagaaatgtatcggaggcaggagagtgtgagtaaggatacggcaggg
aaaggcggggtggatgatgattttgagtactga

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