Arthrobacter jiangjiafuii: KKR91_00265
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Entry
KKR91_00265 CDS
T07979
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ajg
Arthrobacter jiangjiafuii
Pathway
ajg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ajg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KKR91_00265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajg03400
]
KKR91_00265
Enzymes [BR:
ajg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
KKR91_00265
DNA repair and recombination proteins [BR:
ajg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KKR91_00265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
LigD_N
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
QWC10139
UniProt:
A0A975M5H9
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Position
49133..51706
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AA seq
857 aa
AA seq
DB search
MASSGAGLKQQETVNVDGHRLRLTNLDKVLYPETGTTKADVLSYYAAVAGALLPHSRDRP
ATRKRWVHGVGTPEEPGQVFFQKNIDTSAPTWVKRFEIEHKTSTNIYPLVNDLATLTWLA
QSAALEIHVPQWRFGPRGKINNPDRLVLDLDPGEGVDLAQCAEVARLARDILADMGLDAR
PVTSGSKGIHLYAALDGQQTSSDVSAVAHELARALEADHPDLIVSDMKKSLRKGKVLLDW
SQNNANKTTICPYSLRGRFTPTVAAPRTWEELEDPHLAQLDYEQVMQRLADHGDPLAGMD
AGELDGDALEDGAGQAAAADPGTPDRLSKYRSMRDAGKTPEPVPEERAEPSDGNSFVIQE
HHARRLHWDFRLEHDGVLVSWALPKGPPDSPNQNHLAVQTEDHPLDYGSFEGTIPKGEYG
AGEVRIWDHGTYEPEKWRDGKEVIAVLHGQSDGGLASEGGADRRFALIHTGGRGGANNWL
IHLMKHQPAPSAEPAPSPQEAVSAASAAPAPSAKTLPDTTDVSSAVAADATENGMPQVEP
MLATLGTRADVNNDEEWAFEMKWDGVRAVVDVTPEGVRLISRNGNDMTAAYPELQELRSH
LNGERAILDGEIVAVNKAGRPDFGLLQPRMHLTKRREIEAAAARTPVHLMLFDLLWLDGN
SLMDLPYTQRREILEQAVEPAGDDGHVQVPPALELSMDDAVEASKELGLEGVMAKRRNGT
YSPGRRSKSWIKLKNSFTQEVVVVGWRPGKGNRASKIGSLLVAVPDGHDLTYIGRVGSGL
SEKDLALVGGKLKKLARKTAPLDDVPAADASDAQWVRPVLVGEVTYSERTGTGKLRHPAW
RGLRPDKKPSDVVVETP
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagcggagcgggtctgaaacagcaggagaccgtgaatgtggacggtcaccgg
ctgcggctgaccaatctggacaaggtgctctatccggaaaccggaaccaccaaggccgat
gtcctgtcctactacgccgccgtggccggggcactgctgccgcattcccgggaccgtccc
gccacccgcaaacgctgggtccacggggtcggcacaccggaggagcccggacaggtgttt
ttccagaagaacatcgacacctcggcgcccacctgggtgaagcggttcgaaatcgagcac
aagacctccaccaacatttatcccctggtcaatgacctcgcgaccctgacctggctggcg
cagagcgcggccctggaaatccatgtgccgcagtggcgcttcggtccgcgcggcaagatc
aacaacccggaccggctggtgcttgacctggatccgggcgagggcgtggacctggcccaa
tgcgccgaagtggcccggctggcccgcgacatcctcgccgacatgggcctggacgcccgt
cccgtcacttccggctccaagggcatccacctctacgccgcgctggacgggcagcagacc
tccagcgacgtcagcgccgtggcacacgaactggcccgcgcgctcgaggcggaccacccg
gacctgattgtctccgacatgaaaaagtcgctgcgcaagggcaaggtcctgctggactgg
agccagaacaacgccaacaagaccaccatctgcccgtactcgctgcgcggccggttcact
cccaccgtcgccgcgccgcggacctgggaagagctggaagatccacacctggcgcagctg
gactacgaacaggtgatgcagcggctcgccgatcacggcgatccgctggccggcatggac
gccggagaactcgacggcgatgccctggaagacggagccgggcaggctgccgcggcggac
cccggaaccccggaccggctcagcaaataccgcagcatgcgcgacgccggcaagactccg
gaaccggtccccgaagagcgggccgaaccctccgacggcaacagctttgtgatccaggag
caccacgcacgccggctgcactgggacttccggttggagcacgacggcgtcctcgtctcc
tgggcgctgcccaagggaccgccggattccccgaaccagaaccatctggcggtgcagacc
gaggaccacccgctggattacggcagcttcgagggcaccatccccaagggtgaatacggg
gccggcgaggtgcggatctgggaccacggcacctacgagccggaaaaatggcgggatggc
aaagaggtcatcgcggtgctccatggccagtccgacggcggtttggcctccgaaggcggc
gccgaccggcggttcgcgctgatccacaccggagggcgcggcggggcgaacaactggctg
atccacctgatgaagcaccagcctgcaccgtccgccgaaccggcaccgtcaccgcaggag
gcagtctctgcggcctcagcggcgccggcgccctcagccaagacgctgccggacaccacc
gacgtatcctccgccgtcgcggccgacgccacagagaacggcatgccgcaggtggaaccc
atgctcgccacgctcggtacccgcgccgacgtcaacaacgacgaggagtgggccttcgag
atgaagtgggacggagtccgggccgtcgtggacgtgacccccgaaggcgtccggctcatc
agccgcaacggcaacgacatgaccgccgcctacccggaactgcaggaactgcgcagccac
ttaaacggggagcgggccatcctggacggcgagatcgtggcggtcaacaaggcaggccgc
cccgacttcggcttgctgcagccacggatgcacctgaccaaacggcgcgagatcgaagcc
gctgccgcccgcaccccggtccacctgatgctcttcgacctgctctggctggacggaaac
tcgctgatggacctgccctacacccagcggcgggaaatcctggagcaggcggtggagccg
gcaggcgacgacggacatgtccaggtgccgccggcactggagctgtccatggacgacgcc
gtggaagccagcaaggagctggggctcgagggcgtgatggccaagcgccggaacggcacc
tattcccccggccggaggagcaaaagctggatcaagctcaagaactccttcacacaggaa
gtggtggtggtgggctggcgtcccggcaagggcaaccgtgcctccaagatcgggtccctg
ctggtggcagtgccggacggccacgacctgacctacatcggccgcgtgggatcgggactg
agcgagaaggacctggccctggtgggcggaaagctcaagaaactggcccggaagaccgct
ccgctggacgatgttcccgccgccgatgcctccgatgcccaatgggtgcgtccggtactg
gtgggggaggtgacgtactccgaacgcaccggcaccggaaagctgcgccaccccgcctgg
cgcggcctgcggccggacaaaaaaccttccgacgtcgtcgtcgaaaccccctga
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