KEGG   Arthrobacter jiangjiafuii: KKR91_00265
Entry
KKR91_00265       CDS       T07979                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ajg  Arthrobacter jiangjiafuii
Pathway
ajg03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ajg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    KKR91_00265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ajg03400]
    KKR91_00265
Enzymes [BR:ajg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     KKR91_00265
DNA repair and recombination proteins [BR:ajg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     KKR91_00265
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_ligase_A_M LigD_N DNA_ligase_A_C RNA_ligase DNA_primase_S DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: QWC10139
UniProt: A0A975M5H9
LinkDB
Position
49133..51706
AA seq 857 aa
MASSGAGLKQQETVNVDGHRLRLTNLDKVLYPETGTTKADVLSYYAAVAGALLPHSRDRP
ATRKRWVHGVGTPEEPGQVFFQKNIDTSAPTWVKRFEIEHKTSTNIYPLVNDLATLTWLA
QSAALEIHVPQWRFGPRGKINNPDRLVLDLDPGEGVDLAQCAEVARLARDILADMGLDAR
PVTSGSKGIHLYAALDGQQTSSDVSAVAHELARALEADHPDLIVSDMKKSLRKGKVLLDW
SQNNANKTTICPYSLRGRFTPTVAAPRTWEELEDPHLAQLDYEQVMQRLADHGDPLAGMD
AGELDGDALEDGAGQAAAADPGTPDRLSKYRSMRDAGKTPEPVPEERAEPSDGNSFVIQE
HHARRLHWDFRLEHDGVLVSWALPKGPPDSPNQNHLAVQTEDHPLDYGSFEGTIPKGEYG
AGEVRIWDHGTYEPEKWRDGKEVIAVLHGQSDGGLASEGGADRRFALIHTGGRGGANNWL
IHLMKHQPAPSAEPAPSPQEAVSAASAAPAPSAKTLPDTTDVSSAVAADATENGMPQVEP
MLATLGTRADVNNDEEWAFEMKWDGVRAVVDVTPEGVRLISRNGNDMTAAYPELQELRSH
LNGERAILDGEIVAVNKAGRPDFGLLQPRMHLTKRREIEAAAARTPVHLMLFDLLWLDGN
SLMDLPYTQRREILEQAVEPAGDDGHVQVPPALELSMDDAVEASKELGLEGVMAKRRNGT
YSPGRRSKSWIKLKNSFTQEVVVVGWRPGKGNRASKIGSLLVAVPDGHDLTYIGRVGSGL
SEKDLALVGGKLKKLARKTAPLDDVPAADASDAQWVRPVLVGEVTYSERTGTGKLRHPAW
RGLRPDKKPSDVVVETP
NT seq 2574 nt   +upstreamnt  +downstreamnt
atggcgagcagcggagcgggtctgaaacagcaggagaccgtgaatgtggacggtcaccgg
ctgcggctgaccaatctggacaaggtgctctatccggaaaccggaaccaccaaggccgat
gtcctgtcctactacgccgccgtggccggggcactgctgccgcattcccgggaccgtccc
gccacccgcaaacgctgggtccacggggtcggcacaccggaggagcccggacaggtgttt
ttccagaagaacatcgacacctcggcgcccacctgggtgaagcggttcgaaatcgagcac
aagacctccaccaacatttatcccctggtcaatgacctcgcgaccctgacctggctggcg
cagagcgcggccctggaaatccatgtgccgcagtggcgcttcggtccgcgcggcaagatc
aacaacccggaccggctggtgcttgacctggatccgggcgagggcgtggacctggcccaa
tgcgccgaagtggcccggctggcccgcgacatcctcgccgacatgggcctggacgcccgt
cccgtcacttccggctccaagggcatccacctctacgccgcgctggacgggcagcagacc
tccagcgacgtcagcgccgtggcacacgaactggcccgcgcgctcgaggcggaccacccg
gacctgattgtctccgacatgaaaaagtcgctgcgcaagggcaaggtcctgctggactgg
agccagaacaacgccaacaagaccaccatctgcccgtactcgctgcgcggccggttcact
cccaccgtcgccgcgccgcggacctgggaagagctggaagatccacacctggcgcagctg
gactacgaacaggtgatgcagcggctcgccgatcacggcgatccgctggccggcatggac
gccggagaactcgacggcgatgccctggaagacggagccgggcaggctgccgcggcggac
cccggaaccccggaccggctcagcaaataccgcagcatgcgcgacgccggcaagactccg
gaaccggtccccgaagagcgggccgaaccctccgacggcaacagctttgtgatccaggag
caccacgcacgccggctgcactgggacttccggttggagcacgacggcgtcctcgtctcc
tgggcgctgcccaagggaccgccggattccccgaaccagaaccatctggcggtgcagacc
gaggaccacccgctggattacggcagcttcgagggcaccatccccaagggtgaatacggg
gccggcgaggtgcggatctgggaccacggcacctacgagccggaaaaatggcgggatggc
aaagaggtcatcgcggtgctccatggccagtccgacggcggtttggcctccgaaggcggc
gccgaccggcggttcgcgctgatccacaccggagggcgcggcggggcgaacaactggctg
atccacctgatgaagcaccagcctgcaccgtccgccgaaccggcaccgtcaccgcaggag
gcagtctctgcggcctcagcggcgccggcgccctcagccaagacgctgccggacaccacc
gacgtatcctccgccgtcgcggccgacgccacagagaacggcatgccgcaggtggaaccc
atgctcgccacgctcggtacccgcgccgacgtcaacaacgacgaggagtgggccttcgag
atgaagtgggacggagtccgggccgtcgtggacgtgacccccgaaggcgtccggctcatc
agccgcaacggcaacgacatgaccgccgcctacccggaactgcaggaactgcgcagccac
ttaaacggggagcgggccatcctggacggcgagatcgtggcggtcaacaaggcaggccgc
cccgacttcggcttgctgcagccacggatgcacctgaccaaacggcgcgagatcgaagcc
gctgccgcccgcaccccggtccacctgatgctcttcgacctgctctggctggacggaaac
tcgctgatggacctgccctacacccagcggcgggaaatcctggagcaggcggtggagccg
gcaggcgacgacggacatgtccaggtgccgccggcactggagctgtccatggacgacgcc
gtggaagccagcaaggagctggggctcgagggcgtgatggccaagcgccggaacggcacc
tattcccccggccggaggagcaaaagctggatcaagctcaagaactccttcacacaggaa
gtggtggtggtgggctggcgtcccggcaagggcaaccgtgcctccaagatcgggtccctg
ctggtggcagtgccggacggccacgacctgacctacatcggccgcgtgggatcgggactg
agcgagaaggacctggccctggtgggcggaaagctcaagaaactggcccggaagaccgct
ccgctggacgatgttcccgccgccgatgcctccgatgcccaatgggtgcgtccggtactg
gtgggggaggtgacgtactccgaacgcaccggcaccggaaagctgcgccaccccgcctgg
cgcggcctgcggccggacaaaaaaccttccgacgtcgtcgtcgaaaccccctga

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