Artibeus jamaicensis (Jamaican fruit-eating bat): 119058435
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Entry
119058435 CDS
T07223
Symbol
SYNE1
Name
(RefSeq) nesprin-1 isoform X1
KO
K19326
nesprin-1
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119058435 (SYNE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ajm03036
]
119058435 (SYNE1)
Chromosome and associated proteins [BR:
ajm03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
119058435 (SYNE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
Motif
Other DBs
NCBI-GeneID:
119058435
NCBI-ProteinID:
XP_037013509
LinkDB
All DBs
Position
Unknown
AA seq
2068 aa
AA seq
DB search
MILTETLFRKIISFAAPQETQFHTDVMAQASTVLKQAHKRGVELEYILETWSRLEEDRQE
LSRQLEVVEGSIPSVGLVEESEDRLTDRITLYQHLKSSLNEYQPKLYQVLDDGKRLLMSV
SCSDLESQLNQLGENWLNNTNKVSKELHRLETILKHWTRYQSESAALIHWLQSAKDRLEF
WTQQSVTVPQELETVRDHLNTFLEFSKEVDAKSSLKSSVLSTGNRLLRLKKVDTATLRSE
LSHIDGQWTDLLTNIPTVQEKLHQLQMDKLPSRHAISEVMTWISLMEHTIRQDEEDINKC
IGYQAIHEYLQKYKGFKIDINCKQLTVDFVNQSVLQISTQDVESKRSDKTDFAEQLGAMN
KSWQILQGLVAEKIQLLEGLLESWSEYENNVQCMKTWFVTQEKRLKQQQQIGDEASVQNA
MKDCQELEDLIKAKEKEVKKIEQNGLALIQNKKEVSGVVVSTLQELSGTWASLDHMVGQL
KTLLKSVHAQWSRHRAAFDEIHGHLMEARYSLSRFRLLVGSLEAVRVQVDNLQNLQDDLE
KQEKSLQKFGSVTNQLLKECHPPVTETLTNTLKEVTMRWNNLLEEIAEQLHSSRALLQLW
QRYKDYSKQCASTVQQQEERTNELLKAATNKDIADDEVATWIQDCNDLLKGLGTVKDSLF
VLHELGEQLKQQVDASAASAIQSDQLSLSQHLSTLEQALRKQQTVLQAGILDYETFTKSL
EALEAWVVEAAETLQGQDPSHSSDLSTIQERMEELKGQMLKFSSMASDLDHLNELGYRLP
LNDKEIKRMQSLNRHWSLISSQTTERFSKLQSFLLQHQTFLEKCETWMEFLVQTEQKLAV
EISGNYQHLLEQQRAHELFQAEMFSRQQILHSIIADGQRLLEQGQVDDRDEFNLKLTLLS
NQWQGVIRRAQQRRGIIDSQIRQWQRYREMAEKLRKWLVEVSYLPMTGLGSVPIPLQQAR
TLFDEVQFKERVFLRQQGSYILTVEAGKQLLLSADSGAEAALQAELTEIQEKWKSASVRL
EEQKKKLAFLLKDWEKCENGIAESLEKLRTFKKKLSQPLPDHHEELQAEQMRCKELENAV
GTWTDDLAQLTLLKDTLCAYISADDISILNERVELLQRQWEELCHQLSLRRQQVGERLNE
WAVFSEKNKELCEWLTQMESKVSQNGDILIEDMIEKLRKDYQEEIAVAEENKIQLQQMGE
RLARVSHESKASEIEYKLGKVNDRWQHLLDLMAARIKKLKETLVAIQQLDKNMSGLRTWL
AHIESELAKPIVYDSCDSEEIQRKLNEQQELQRDIEKHSTGVASVLNLCEVLLHDCDACA
TDAECDSIQQATRNLDRRWRNICAMSMERRLKIEETWQLWQKFLDDYSRFEDWLKISEKI
AAFPSSSVVLYTVAKEELKKFEAFQRQVHETLTQLELINKQYRRLARENRTDSGCRLKQM
VHEGNQRWDNLQKRVASILRRLKHFIGQREEFETARDSILVWLTEMDLQLTNIEHFSECD
VQAKIKQLKAFQQEISLNHSKIEQIIAQGEQLIEKSEPLDAALIEEELDELRRYCQEVFG
RVERYHKKLIRLPLPDDEHDLSDRELQLDDSAALSDLHWHDTSADSALSPQPSSNHSLSL
AQPLRSERSGRDTPASVDSIPLEWDHDYDLSRDLESAVSRTLTSEDEEGQEDKDFYHRGA
VGLSGDPSALESRLRQLDKALDDSRFQMQQTEDVIRSKTPTGPELDTSYRGYMKLLAECS
GSIDSVRRLEHKLKEEEENFPGFVNLNSTETQTAGVIDRWELIQAQALSKERRMKQNLQK
WQQFGSDLNNIWTWLGATEEELEQLRRLELSTDIQSIELQIKKLKELQKAVDHRKAIILS
INLCSSEFTRTGSEESRALQDRLSQMNTRWDRVCSLLDEWRGLLQDALMQCQDFHEMSHA
LLLMLENIDRRKNEIVPINSHLDAETLQDHHKQLMQIRQELLESQLKVASLQDMSCQLLV
NAEGTDCLEAKEKVHVIGNRLKLLLKEVSRHLKELEKLLDMSSSQQDLSSWSSADELDTS
ESVSPTSGRSTPNRQSTVHKRWLRFLPF
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgattttgactgaaacactcttcaggaagataatcagcttcgcagccccgcaggaaacg
caattccacacagacgtcatggcgcaggcttccacagtcctgaaacaggctcacaaaagg
ggagtggagctggagtacattctagagacatggtcccgcctggaggaggatcggcaggag
ctcagcagacagctggaggtggtggagggcagcatccccagtgtggggctggtggaggag
agcgaggacaggctcactgatcggatcacactctaccagcatttgaaatccagccttaat
gagtaccagcccaaactatatcaagtgttagatgatgggaaacgacttctgatgtccgtt
agctgctcggatctggaaagtcagctaaatcagcttggagaaaactggttaaataatacc
aacaaagtgtctaaggaacttcacagactggaaacaatattgaaacactggaccaggtat
caaagtgaatctgcagctctaattcactggctacagtctgcaaaagacaggctagagttt
tggacgcagcaatcggtgacagtccctcaagagctagagaccgtccgtgatcatctgaac
actttcctggagttttccaaggaagtggatgccaagtcttccctgaaatcttctgttctg
agcactggaaatcggcttctccggttaaagaaagtggacacagccaccctgcgctctgaa
ctgtcgcacattgatggccagtggaccgacctgctgacaaatattccaaccgttcaggaa
aagctccaccagctccagatggacaagctgccgtcgcgccacgccatttctgaggtcatg
acctggatctctctcatggagcacaccattcggcaggatgaggaggacataaacaagtgc
attggttaccaggcaattcatgaataccttcagaaatataagggttttaagatagacatt
aactgcaaacagctgacagttgatttcgtgaaccagtccgttctgcagattagcactcag
gacgtggagagtaaacgcagtgacaagactgattttgcggagcaacttggagccatgaat
aagagttggcagatcctgcaaggtctggtagctgaaaagattcagttgttggaaggctta
ttggaatcttggtcagagtatgaaaataacgtacagtgtatgaaaacttggtttgtaacc
caggagaagagactgaaacaacagcagcaaattggagatgaggcttccgttcagaatgca
atgaaagactgtcaggaactagaggatttgattaaagccaaagaaaaagaggtaaagaaa
attgaacaaaatggacttgctctgattcagaacaagaaagaagtgtctggcgtcgtcgtg
agcacactgcaggagctcagcgggacctgggccagtctggaccacatggtcgggcagctg
aagacgctgctgaagtccgtgcatgcgcagtggagtcggcacagagcggcctttgatgag
atacacggccacctcatggaggcccggtactctctgtcccggttccgcctgctggtcggc
tcgttggaggccgtgcgagttcaggttgacaaccttcagaatcttcaagatgatctagaa
aaacaggaaaagagcttacagaaatttggctctgtcacaaaccaactattaaaggagtgt
cacccgcctgtgacagaaactcttaccaacacattaaaggaagtcactatgagatggaat
aacttgctggaagagatcgctgaacagctgcactccagcagggccctcctgcagctctgg
cagaggtacaaggactactccaaacagtgtgcttctacagttcagcagcaggaggagcga
accaacgagctcctgaaggcagccactaataaggacatcgccgacgacgaagtcgctacg
tggattcaagactgcaacgacctcctcaagggactggggacagttaaggattccctgttt
gttctccatgagctgggagagcaactcaagcaacaagtggatgcttcagcagcatcagcc
attcaatcagaccaactctctttgagtcaacacttatccacccttgagcaggctcttcgc
aaacagcagactgtgttacaggctgggattctggactatgaaaccttcaccaagagctta
gaagctttggaagcctgggtagtagaagcagcagaaacgctgcaagggcaggaccccagc
cactcctcggacctctcgaccatccaggagaggatggaggagctcaagggacagatgtta
aaattcagcagcatggcctcagacttagaccatctgaacgagcttggctacaggctgccc
ctgaatgataaagaaatcaaaaggatgcagagtctgaaccggcactggtccctcatctcc
tctcagaccacagagagattcagtaagttgcagtcatttttgcttcaacatcagactttc
ttggaaaaatgtgaaacatggatggaattcctggttcaaacggagcaaaagttagcagtg
gagatttcaggcaattatcagcatcttctggagcagcagagagcgcatgagttgtttcaa
gcggagatgttcagtcgtcaacagatcttgcactcgatcatcgctgatgggcaacgtctt
ctggaacaaggtcaagttgatgacagggatgaattcaacctgaagttgacacttctcagt
aatcagtggcaaggagtgattcgcagggcccagcaaaggaggggcatcatcgacagccag
atccgccagtggcaacgctacagggagatggcagaaaagctgcgcaaatggctggtggaa
gtgtcctatctgcccatgactggtctcggaagtgtcccaataccactgcaacaagcaagg
accctctttgatgaagtgcagttcaaagaaagagtgttcctgcgacaacaaggcagctac
atcctgaccgtggaggccggcaagcagctgctgctgtctgcagacagcggggctgaggcc
gccctgcaggctgaactcacggaaatccaagagaaatggaaatccgccagcgtgcgcctg
gaggagcagaagaaaaaactggccttcttgttgaaagactgggaaaaatgtgagaatgga
atagctgagtccctggagaaactccgaactttcaaaaagaagctctcccagcctctgcca
gatcaccacgaagagctccaagcggagcaaatgcgctgcaaggaattggaaaatgccgtg
gggacctggacagacgacctggcacagctgaccctgttgaaggacaccctctgtgcctac
atcagtgccgatgatatctccatcctgaacgaacgtgtagagcttctgcagaggcagtgg
gaagaactctgtcaccagctctccctaaggcgacagcaagtcggcgagagactgaacgaa
tgggcggtcttcagtgagaagaacaaggagctctgcgaatggctgacgcagatggaaagc
aaagtttcccagaacggagacatcctcattgaagacatgatagagaagctcaggaaggat
tatcaagaggaaattgccgttgccgaagagaacaaaatacagctccaacaaatgggagag
cgacttgctagagtcagtcacgagagcaaagcctctgaaattgagtacaagctcggcaag
gtcaatgaccggtggcagcacctcctggacctcatggcagccaggataaagaagctgaag
gagactctggtcgccatacagcagctggacaagaacatgagcggcctgaggacgtggctg
gctcacatcgagtcagagctggccaagcccatcgtctacgactcctgcgactcagaagaa
atacagagaaagctaaatgagcagcaggagcttcagagggacatagagaaacacagcacg
ggtgtggcctccgtcctcaacctgtgcgaggtcctgctgcatgactgtgatgcttgcgcc
acagacgcagaatgtgactccatccagcaggctacacggaacctggaccggcgatggagg
aacatctgtgctatgtccatggaaaggagactcaaaattgaagagacatggcaactgtgg
cagaagtttctggatgactattcgcgttttgaagattggctcaagatttccgaaaagata
gctgctttccccagctcttctgtggtgctctatacggttgccaaggaagaactgaagaaa
ttcgaggcattccagcgacaggtgcacgagaccctgacccagctggaactgatcaacaag
cagtaccgccggctggcccgggagaaccgcactgactccggctgtcgcctgaagcagatg
gtccatgaaggcaaccagagatgggacaacctgcagaagcgcgtcgcctccatcctgcgc
agactcaagcatttcattggccagcgggaggagtttgagacagcacgggacagcattctg
gtgtggctgacagagatggatttacagctcactaatattgagcacttttctgagtgtgac
gttcaagctaaaataaagcaactcaaggccttccagcaggaaatctcgttgaaccacagc
aagatcgagcagataatcgcccaaggagaacagctgattgaaaagagcgagcccttggac
gcggcgcttatcgaggaggagctggacgagctccggcgctactgtcaggaggtcttcggg
cgcgtggaaagataccacaagaagctgatccgcctgccgctgcccgatgatgaacatgac
ctctctgaccgggagctgcagctggatgactccgcagctctgtcggacctccactggcac
gacacctctgcggacagtgcgctgtccccgcagccttcctccaaccactccctctcactc
gcccagcccctgcggagcgagcggtcgggacgggacacccctgccagcgtggactccatc
cccctggagtgggaccatgactacgacctcagtcgtgacctggagtctgccgtgtccaga
actctgacctctgaggatgaagagggtcaagaagacaaagatttctaccacaggggagcc
gttggcttatcaggggatcccagtgccttagaatcacgtctccgccaactggacaaagcc
ctggatgacagccgctttcagatgcagcaaacggaagatgtcattcgcagcaaaactccc
acaggaccagagctggacaccagctaccgaggctacatgaagctgctggccgagtgcagc
ggcagcatagactccgtgaggaggctagagcacaagctgaaggaggaagaggagaatttt
cctggctttgttaacctgaacagcactgaaacccagacagcgggtgtgattgaccgatgg
gagctcatccaggcacaggctctgagcaaggagcggaggatgaaacagaacctccagaag
tggcagcagtttggctctgacctgaacaacatctggacctggctaggggcaacggaggag
gagttggagcagctacggcgcctggagctcagcaccgacatccagtccattgagctccaa
atcaaaaagctcaaggagctccagaaagctgtggaccaccgcaaagccatcatcctctcc
atcaacctgtgcagctccgagttcacccggactggcagtgaggagagccgggctctgcag
gaccgcctgtcccagatgaacacgcgctgggaccgggtgtgctccctgctggacgagtgg
cggggtctgctccaggacgccctgatgcagtgtcaggattttcatgaaatgagtcatgct
ttgctgcttatgctggagaacatcgacagaaggaaaaatgaaattgttcctatcaattct
cacctcgatgcggagacccttcaggaccatcacaaacaacttatgcaaataaggcaggag
ctattggaatcccaactcaaagtggcctcactgcaagatatgtcttgccaactgttggtg
aatgctgaaggcacagactgtttagaagccaaagaaaaagtccacgtgattggaaatcgg
ctcaaacttctgttgaaggaagtcagccggcacctcaaggagctggagaagttattagac
atgtccagcagtcagcaggatttgtcctcctggtcatctgctgatgagctggacacctcg
gaatctgtgagtcctacgtcaggaagaagcaccccaaacagacagagcacggtccacaaa
agatggctccgattcctccctttctga
DBGET
integrated database retrieval system
