Arthrobacter jinronghuae: N2K98_12170
Help
Entry
N2K98_12170 CDS
T09565
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
ajr
Arthrobacter jinronghuae
Pathway
ajr00521
Streptomycin biosynthesis
ajr00523
Polyketide sugar unit biosynthesis
ajr00541
O-Antigen nucleotide sugar biosynthesis
ajr01100
Metabolic pathways
ajr01110
Biosynthesis of secondary metabolites
ajr01250
Biosynthesis of nucleotide sugars
Module
ajr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ajr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
N2K98_12170 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
N2K98_12170 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
N2K98_12170 (rfbD)
Enzymes [BR:
ajr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
N2K98_12170 (rfbD)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
N2K98_12170 (rfbD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
NAD_binding_4
GDP_Man_Dehyd
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
UWX77729
LinkDB
All DBs
Position
2593748..2595181
Genome browser
AA seq
477 aa
AA seq
DB search
MTPADEAPGIFAKALAAHPTPIPGVVVFDLPVHGDNRGWFKENWQRSKMAALGLPDFGPV
QNNISFNETAGTTRGIHAEPWDKYISVATGRVFGAWVDLREGPTFGRTFHHVLDPSQAIF
IPRGVGNAFQTLEDGTAYTYLVNDHWSADAQEKYTFLNLADPTAAIPWPIPLDSAETSAK
DKAHPFLPEVAPMPAKRVLVLGAGGQLGTALRFLFADRGDTVFAARADFDLADPAAYDAV
RWQDYEVVINAAAYTAVDAAETPSGRRDAWNINTSAVSRLARIAAEHRITLVHVSTDYVF
DGTSANYREDDQVCPLGVYGQTKAAGDAAAATAPRHYIIRTSWVIGEGHNFVRTMASLAS
KGVAPSVVNDQIGRLTFAEDIAAGIRHLLDTRAPFGTYNLTNDGEPGSWADVAAAVYRLA
GADPAAVTGVSTEEYFASKPDAAPRPRNSVLDLAKIKATGFSPRDAGQALAAYLNGE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcctgctgacgaagcgcccggcatcttcgccaaggcgctggccgcgcatcccacg
cccattcccggcgtcgtcgtatttgaccttccggtgcacggcgacaaccgcgggtggttc
aaggaaaactggcagcgcagcaagatggcggcactgggccttcccgactttggtcccgtg
cagaacaacatttccttcaacgagactgccggcaccacccgcggcatccatgcagagccg
tgggataagtacatctccgtagcgactggccgcgttttcggcgcctgggtggatctgcgg
gaaggcccgacattcggccgcacgttccaccacgtcctggatccctcgcaggcgatattt
atcccgcggggcgtgggcaatgctttccagacgctggaagacgggactgcgtacacctat
ctggtcaacgaccattggagcgccgacgctcaggaaaaatacaccttcctgaacctcgcg
gatcccaccgcggctatcccctggcccatccccctcgactccgcagagacctcagccaag
gacaaggcccatccgttcctccctgaggtcgcccccatgccagccaagcgcgtgcttgtc
ctgggcgctggcggccagctcggtacggccctgcggtttcttttcgctgaccgcggcgat
accgtattcgccgcacgggccgacttcgatctggctgaccctgctgcctacgacgccgtc
cgctggcaggattacgaagtcgtcatcaacgccgccgcctatactgccgttgacgccgca
gaaacaccatccgggcgcagggacgcgtggaacatcaacacgtccgccgtgtcccggctg
gcgcggatagcagcagagcaccggatcacgctggtccatgtttccaccgattacgttttc
gacggaacttcggccaactaccgcgaggacgaccaggtctgccccttgggcgtgtacggc
cagaccaaggcggcaggtgacgccgcagcggccaccgcgccgcgccattacatcatccgc
accagctgggtgatcggagagggacataatttcgtccgcacgatggcgtcgctggcgtcc
aagggcgtcgccccgtctgtggtcaatgaccagatcggtcggctcacgttcgccgaggat
atcgctgccggcatccggcacctgctggatacgcgcgcacctttcggcacctacaacctc
accaatgacggcgagcccggttcgtgggccgacgtcgcggccgcggtctaccggctggcc
ggcgccgaccctgcagccgtgaccggggtgagcaccgaggaatacttcgcgtccaagccc
gatgccgctccccgcccgcgtaacagcgtcctggatctggccaagatcaaagccaccggt
ttcagcccccgcgatgccggccaagccctcgccgcctacctcaacggcgagtag
DBGET
integrated database retrieval system