Acidovorax sp. JS42: Ajs_0474
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Entry
Ajs_0474 CDS
T00455
Name
(GenBank) RNA-binding S4 domain protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
ajs
Acidovorax sp. JS42
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ajs03009
]
Ajs_0474
Enzymes [BR:
ajs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
Ajs_0474
Ribosome biogenesis [BR:
ajs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Ajs_0474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABM40725
UniProt:
A0A9J9FS86
LinkDB
All DBs
Position
488791..489873
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AA seq
360 aa
AA seq
DB search
MGRGAARSTARDNSAMPETPARPPAPSVPAPSASASPSPLRPRLVLRKPTAPAAPVATGK
APGRSAGRTAGTAAPSGAAGAPRTASRHAPATPRPPATRAPAGAAQAPADGRMRLNKRMA
DLGLCSRREADDWIAQGWVRVNGQVAAMGLQVGPHDRIDVDRAAQGHQRQQVTILLHKPM
GYVSGQAEDGHTPAVALINPRTHWKDDESRTRFSPAQLKGLAPCGRLDIDSVGLLVLTQD
GRVARQLIGEDSTVDKEYLVRVQYGDRAQDVRAVFPADKLALLNHGLALDGQQLKPAVVE
WQNPEQLRFVLREGKKRQIRRMCELVGLKVVGLKRIRIGQVLLGKLPPGQWRYLAPGERF
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgggacggggcgcggcgcgctccacggcgcgagacaatagcgccatgcccgaaacgccc
gcacgcccccccgcaccgtccgtccccgcaccgtccgcttctgcttcgcccagtccgctg
cgcccgcggctggtgctgcgcaagccgaccgcgcccgcagcacctgtggctaccggcaag
gcgccgggccggtccgcaggccggacggccggcacggccgcacccagcggcgcggcaggc
gccccccgtacggcgagccggcacgcgccggccacgccgcgccctcctgccacccgtgcg
cccgctggcgctgcgcaggcgcctgcagacggccgcatgcgcctgaacaagcgcatggcc
gatctgggcctgtgctcgcgccgcgaggccgacgactggatcgcccagggctgggtgcgc
gtcaacgggcaggtggcggccatggggctgcaggtggggccgcacgaccgcatcgacgtg
gaccgcgcggcccagggccaccagcgccagcaggtgaccatcctgctgcacaagcccatg
ggctatgtgagcggccaggccgaggacggccacacgccggccgtggcgctgatcaaccca
cgtacgcactggaaggacgatgagagccgcacgcgcttttcgcccgcgcaactcaagggc
ctggcaccctgcgggcggctggacatcgactccgtgggcctgctggtgctgacgcaggac
ggccgcgtggcgcgccagctcatcggcgaggactcaacggtggacaaggagtacctggtg
cgcgtgcagtacggcgatcgcgcgcaggatgtgcgcgccgtcttccccgctgacaagctg
gcgctgctgaaccatggcctggcgctggacggccagcagctcaagccggcggtggtggag
tggcagaaccccgagcagttgcgcttcgtgctgcgcgagggcaaaaagcgccagatccgc
cgcatgtgcgagctggtgggcctcaaggtggtgggcctcaagcgcatccgcatcggccag
gtgctgctgggcaagttgccgccgggccagtggcgctacctggcgccgggtgagcgcttt
taa
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