Acidovorax sp. JS42: Ajs_2355
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Entry
Ajs_2355 CDS
T00455
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ajs
Acidovorax sp. JS42
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajs03400
]
Ajs_2355
Enzymes [BR:
ajs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ajs_2355
DNA repair and recombination proteins [BR:
ajs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Ajs_2355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
FGase
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABM42516
UniProt:
A0A9J9KKD1
LinkDB
All DBs
Position
complement(2497459..2500764)
Genome browser
AA seq
1101 aa
AA seq
DB search
MSEAAAQAAYEHNGQPVTREAFYAIACDPQRSVAVEACAGAGKTWMLVSRMLRALLDGCA
PHEILAITFTKKAAGEMRQRLQEWLQEFAAKPLPDLEKELIARGIGPQRALDKREQLQKL
YRQTLDAGRPVQIRTFHSWFAALLGTAPLAVLEQQGLPAHYDLLEDDAEAVREVWRPYLA
AVAQDAALRADYEACVAHHGRSQTHKALEGALAKRVEFALADEAGVVDASIPHFGTQFAD
LAGLHHPADALASDAARQRWHAWAQVLGAQANKTPQKAADAVIDAWLCDDLGQRLDTLRK
AFFVASEDRLSKNLEKFAAAQEAEGELQRLCAARRQHEAWLHQQRMARLARALIAQFAQL
KRERGWVDMNDVERTALVMLSDPILSGWVQERLDARVRHLLVDEFQDTNPLQWQALHAWL
AGYAGAGGGQQPPSVFIVGDPKQSIYRFRRAEPQVFKAAQAFVREGLGGDLLACDHTRRN
AIGVIAAVNQAMQAAQAQGEYAGFRDHTTESRDPGQLLRLPPITAPDGGDAAAATAPEWR
DTLTQPRHEAEETLRMRECAQAAQWVAAQIAAGVQPQEIMVLARKRDRLASLQEALRALH
VPCVQPEKAELGEAPEVQDIVALLDALVSPGHDLSLARALRSPLFGLTDHALVQIALRVR
QTAAEGSPCSWFDVLQKSELLPPDLQALAPVLAQYKRWVETRPPHDALHAIYEHGDVPAR
FAAAAPASQRAGVLANLRALLAAALQQDGGRYLTAYAFVRAMKRPGMRAPGRVEAQAVRL
LTIHGAKGLEAHSVLLLDTDARAQKAETMGALVDWPGEQAAPLRFVFLASESNPPPSAVD
LLAAELAERQREELNTLYVAMTRAKHCLALSAVQSSTAAPGSWWNRLAESLQDAPVPPAA
PLGDVADDAAVALPQLPPYAGAAPGAQAAAAGAPVSTPQSRQGEAMHQLLEQAGVVGARR
AGGVWPARRLAQLARDFDITAEAAAQAAAMARSILQGEGAWAWNPDHVEQALNEAPLVYQ
GQGLRLDRLVRLRQPREGARWWVLDYKSATAPERQPQLMAQLRLYREAVGAQFPGERVGA
AFLTGDGRLVVVDAPGQGVLF
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagctgccgcgcaagccgcctacgaacacaacggccaaccggtcacgcgggag
gccttctacgccattgcctgcgacccgcagcgcagcgtggccgtggaggcctgcgccggc
gccggcaagacctggatgctggtctcgcgcatgctgcgcgcgctgctggacggctgtgcg
ccgcacgagatcctggccatcaccttcaccaagaaggccgcgggcgaaatgcgccagcgc
ctgcaggaatggctgcaggagtttgcggccaagccgctgcctgatctggaaaaggagctg
attgcaagaggaatcgggccgcagcgcgctctggacaagcgcgagcagctacaaaaacta
taccggcagacgctggacgcgggccgccccgtgcagatacgcacctttcacagctggttt
gcggcgctgctgggcacggcgccgctggcggtgctggagcagcagggcctgcccgcccat
tacgacttgctggaggatgacgccgaggcagtgcgcgaggtctggcgcccctacctcgcc
gccgtggcgcaggacgccgcgctgcgcgcggattacgaagcctgcgtggcgcatcacggc
cgctcgcagacgcacaaggcgcttgaaggcgcgctggccaagcgcgtggagttcgcgctg
gccgacgaggcgggcgtggtggacgcatcgatcccgcatttcggcacgcagttcgcggac
cttgccggcttgcaccatccggccgatgcgctggccagcgacgcagcgcgccagcgctgg
catgcctgggcccaggtgctgggggcgcaggcgaacaagacgccgcagaaggccgccgac
gcggtgatcgacgcctggctgtgcgacgacctgggccagcgtctggacacgctgcgcaag
gccttcttcgtggccagcgaggatcgcctgtccaagaatctggagaagttcgccgccgcg
caggaggccgagggcgaacttcagcgcctgtgcgccgcgcgccgccagcacgaggcctgg
ctgcaccagcagcgcatggcgcggctggcgcgtgcgctcatcgcgcagttcgcccagctc
aagcgcgagcgcggctgggtggacatgaacgacgtggagcgcacggcgctggtcatgctg
tccgaccccatcctctcgggctgggtgcaggagcgcctggacgcgcgcgtgcgccacctg
ctggtggatgagttccaggacaccaacccgctgcagtggcaggcgctgcatgcctggctg
gccggttacgcgggcgcgggcggcggccagcagccgcccagcgtgttcatcgtcggtgac
cccaagcagagcatctaccgctttcgccgcgccgagccgcaggtcttcaaggccgcccag
gccttcgtacgcgaggggctggggggcgacctgctggcctgcgaccacacgcggcgcaac
gccatcggcgtgatcgcagcggtgaaccaggccatgcaggcggcgcaggcgcagggcgag
tacgcgggctttcgcgaccacaccaccgaatcgcgcgacccggggcaactgctgcgcctg
cccccgatcacggcgcctgacgggggtgatgccgccgcggccactgcccccgagtggcgc
gacactctgacccagccgcgccatgaagccgaggaaaccctgcgcatgcgcgaatgcgcg
caggctgcgcaatgggtggcggcgcagatcgccgcgggcgtgcagccgcaggagatcatg
gtgctcgcgcgcaagcgcgaccggctggcctccctgcaggaggccctgcgcgcgctgcac
gtgccctgcgtgcagcccgagaaggccgagctgggcgaggcgcccgaggtgcaggacatc
gtcgcgctgctggatgcgctggtctcaccggggcatgacctttcgctggcgcgtgcgctg
cgctcgccgctgttcggcctgacggatcacgcgctggtgcagattgcgctgcgggtacgc
cagacggccgcagaaggatccccgtgcagctggttcgacgtacttcaaaaaagtgagctg
cttccgcccgacctgcaagcgctggcgcctgttttggctcaatacaagcgatgggtggaa
acacgccccccccacgatgcgctgcatgccatctacgaacacggcgacgtgcccgcgcgc
tttgccgccgcggctcccgcctcgcagcgtgcgggcgtgctggccaacctgcgcgctttg
ctggccgcggcgctgcagcaggacgggggacgctacctcacggcctatgccttcgtgcgc
gccatgaagcgcccgggcatgcgcgcacccggccgcgtggaggcgcaggccgtgcgcctg
ctcaccatccacggcgccaaagggctggaggcgcacagcgtgctgctgctggacaccgat
gcgcgcgcgcagaaggccgagaccatgggcgcgctggtcgactggccgggcgagcaggcc
gctccgctgcgctttgtctttctggccagcgaatccaacccgccgcccagtgcggtggac
ctgctggcggcggaactggcggagcgccagcgcgaggagctcaacaccctctatgtggcc
atgacacgcgccaagcattgcctggccttgtcggcggtgcagtccagcacggccgcgccc
ggcagttggtggaaccggctggccgagtccctgcaggacgcgccagtgccgcccgccgcg
ccattgggcgatgtggctgacgatgccgccgtcgcgttgccgcagcttccgccgtatgcg
ggggctgcgccgggggcacaagccgctgcggcgggtgctcccgtctccaccccgcagtcg
cgccagggcgaggccatgcaccagttgctggagcaggcgggcgtggtcggcgcccggcgg
gcgggcggcgtgtggcccgcgcggcggctggcgcagctggcgcgcgacttcgacatcacg
gcggaggccgccgcacaggccgcagcgatggcgcggagcattctgcagggcgagggtgcc
tgggcgtggaaccccgatcacgtggaacaggccctcaacgaagcgccgctggtgtaccag
ggccagggtctgcgtctggaccgcctggtgcggctgcgccagccgcgtgagggtgcgcgc
tggtgggtgctggactacaagagcgccaccgcgcccgagcgccagccgcagctgatggcc
cagctgcgcctgtaccgcgaagcggtgggagcgcagtttccgggcgagcgggtgggcgcg
gctttcttgacgggcgatgggaggctggtggtcgtggacgcgccagggcagggcgtgctg
ttctga
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