Acinonyx jubatus (cheetah): 106972086
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Entry
106972086 CDS
T04657
Name
(RefSeq) LOW QUALITY PROTEIN: synemin
KO
K10376
desmuslin
Organism
aju
Acinonyx jubatus (cheetah)
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aju04812
]
106972086
Cytoskeleton proteins [BR:
aju04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
106972086
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
106972086
NCBI-ProteinID:
XP_053079593
LinkDB
All DBs
Position
B3:17349211..17377345
Genome browser
AA seq
1569 aa
AA seq
DB search
MLSWRLHTGPEKAELQELNARLYDYVCRVRELERENLLLEEELRGRLGQEGLWAEGQARF
AEEARGLRQQLDELSWATTLAEGERDALRRELWELQRLGEEERAARGRLDAELGAQRREL
QEALGARAALEALLGRLQAERRGLEAAHERDVRELRERAARLTMSYRARAAGPAASPPRL
REVHDSYALLVAESWRETVQLYEDEVRELEEALRRGQESRREAEEETRQCAQEAEALRRE
ALELEQLRALLEQELLRLREAYELQAEERQRVITCLEDEKAALTLAMADRLRDYQELVQV
KTGLSREVATYRALLEGESNPEILILTEHIENVPQEFRKTSYQCASTVLQRENERNLFPR
RKAPPASFSHSLAQRSHLSAKPGARPAVPGAAGSGFLGSGYSSLTATRWEKTDGKTADSQ
EKPANSQASVRTFSPVPGLLRDTEAPAKTFPERPRTAGTKAASANVAREPALAQKPYRDN
VSAGASKSTWSSERTVLVEKKTGANVTREQERNRPGAIQTKWEEKVFDSKEKASEERNLR
WEELTKLDKEARKRESQQMREKERGKESAKEKSVREREVPISLEVSQDSTPGVAPKGLQT
PLQGDARDGAGRGMEKREARFRLDRGDTTSSLKGDSTTETIAENIVSSILKQFTQSPDTE
TSANSFPDTKVTYMDRKELPGDRKTKTEIVVESKLTEEVDISDEAGLDYLLSKDVKEVDL
KGKSAERMLGDIINLGLKGREGRARVVNVEIIEEPVSYVAGEKADEFSTPFEVEEVDDVS
PGSKGLAEEEEGYGETDVMFSGNQHKKTKRPQENVTHVEEVMEAGDSEGEQSYFVSTPDE
HPAGQDRDEGSVYGQIHIEEESTIRYSWQDEIVPGTRRRIKTDDGLGEKVVKPSDISEPS
AEEEVGYTHWKEQARSGEFHAEPTVIEKEIKIPPEFHMSIKGSFKEPRHQLVEVIGQLEE
SLPERMKEELSALTREGQGGPENVSVDVKKVHTSGGRSVTLVAEVNLSRTVDADQLDLEE
LSKDEASEIEKTVESVVRDSLARRHSPAPGSPDGETAEEPPAAGFRFKRWATQELYRPGG
EEGDASRASQGTEQVASPGPVSATVEVTSPRGFAQSHVVEDVSRSVRRVKVDPTGIWRTE
QVSREGPTAQVVEVSGEGDLSPALSSPGATWSVRHFTLSPDQSQVSQEVFFQRSVPAFRE
AGGTEEPGLSTDMDTAGRRSVFGSEQFHAEREIAFQGPISGSGKVGNYFQTEESXTQTSV
KDLQVGPREGFGEQIQFRALLSDRRALSIREASVSTEEWSGDGTSIRQVTVWAQEHQTTE
HIVXPCPREFSHSESSAHGEGLADVSQAARSSAVGGRILMTGKSTFQSASSQWPQEASVG
DARGAEETPGMSRAFRHICLGPAETTASERVVFHEPVSKSLAPAGSAGSPELGELADGSG
VLRHVARGPKDSLFTFQMDISHVEASPRWTQDTTVFFPAGTEAVARGAPDRGAWRDGGSG
NAWVASVSFQGSSGDGHQVPGEQGKAQAEFDRTVQLQRMVDQRSVISDEKKVALLYLDNQ
EEDNEGHWF
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcttggcggcttcacacgggccccgagaaggccgagctgcaagagctcaacgcc
cggctctacgactatgtgtgccgcgtgcgggagctggagcgcgaaaacctgctcctggag
gaggagctgcgcggccggctcgggcaggagggcctgtgggccgaggggcaggcccgcttc
gccgaggaggcgcgcggcttgcggcagcagctggacgagctgagctgggccacgactctg
gccgagggcgagcgcgacgcgctgcggcgcgagctgtgggagctgcagcggctgggcgag
gaggagcgcgccgcccgcggccgcctggacgccgagctgggcgcgcagcggcgcgagctg
caggaggctctgggcgcgcgcgccgccctcgaggcgctgctgggccggctgcaggccgag
cgccggggcctggaagcggcccacgagcgcgacgtgcgggagctgcgcgagcgcgccgcc
cgcctgaccatgagctaccgagcccgcgccgccggccccgccgcgtccccgccgcgcctg
cgggaggtgcacgacagctacgcgctgctggtggccgagtcgtggcgggagaccgtgcag
ctgtacgaggacgaggtgcgcgagctggaagaggcgctgcggcgcggccaggagagccgg
cgcgaggccgaggaggagacgcggcagtgcgcgcaggaggcggaggcgctgcggcgcgag
gcgctcgagttggagcagctgcgcgcgctgctggagcaagagctgctgcggctgcgggag
gcgtacgagctgcaggcggaggagcggcagagagtgattacctgcctggaggatgagaag
gcggcccttaccttggccatggcggacaggttgcgggactatcaggagcttgtgcaggtg
aagactggcctcagccgggaggtggcaacatatcgagccttactagaaggagaaagtaat
ccagagatactgatcttgactgagcacattgaaaacgtgccacaagagttcagaaaaaca
tcctatcagtgtgccagcacggtgctgcagagggaaaatgaacgaaatctgtttcccagg
cggaaagcacctccggccagcttcagccacagcctggcgcagcgctctcacctgtcggca
aagcccggagctcggcccgccgtcccaggtgctgcgggcagtggcttcctaggctcggga
tattcttccctaaccgctacccggtgggagaaaactgacggcaaaactgccgactctcag
gaaaaacctgccaacagccaagccagcgtcagaactttctctccagtgcccggtctttta
agggatactgaggctccagcgaaaacattccccgaaagaccgagaaccgcgggtacaaag
gccgcctctgctaatgtagccagagagcccgcccttgcccaaaagccctatcgggacaat
gtgtcggcaggtgcttccaaaagcacgtggtcaagtgagagaaccgtccttgtggaaaag
aagacgggggctaacgtcacgagagagcaggagagaaacaggccaggtgccatccaaaca
aagtgggaagagaaggtgtttgattccaaagagaaggcttcagaggagaggaatctaagg
tgggaagagctgacaaagttagataaagaagcaagaaaaagagaaagccagcaaatgagg
gaaaaggagagagggaaggagtcggcgaaggagaagagtgttcgagaaagagaggtaccg
atcagtctagaagtctcccaggatagcacaccaggggtggccccgaaaggtttgcagact
cccctccagggggatgctcgtgatggtgcaggcagaggcatggaaaagagggaggccagg
ttcaggctggaccgcggcgacaccaccagctccctgaagggtgactccacgactgaaacc
atagccgaaaacatcgtctccagtatcctgaagcagtttacccagtctcctgatacagag
acatctgctaattcttttccggacacgaaggtcacttacatggacaggaaggagcttccc
ggcgacaggaaaacaaagactgagatagtcgtggagtcgaaactgaccgaagaggtggat
atttcagacgaggctggcctggactatcttctgagcaaggatgttaaggaggtggacctg
aaaggaaaatcggctgagcggatgctaggagacataatcaaccttggtctgaaaggaaga
gaggggagggcaagggtggtcaacgtggagatcattgaggagcccgtgagctatgtcgct
ggtgagaaggcggatgagttttctacccccttcgaagtggaggaggttgatgatgtgtct
ccgggctccaaggggctggctgaggaggaagaaggttatggagaaacagacgtcatgttc
tcaggcaatcagcataaaaagaccaagcggccccaagagaatgtaactcacgttgaagaa
gtaatggaggcgggtgactcagagggagagcagagttattttgtgtcgaccccagatgag
caccctgcggggcaggacagagacgagggctcggtgtatgggcagatccacattgaagaa
gagtccaccatcaggtactcttggcaagatgaaatcgtgccagggactcggagaagaata
aagacagatgatgggctgggggagaaggtggtgaagccgtcggacatctcagaaccttct
gcggaggaggaggtgggttatactcactggaaggaacaagctagaagtggtgaatttcat
gctgagcccacagtcatcgagaaggagattaagataccacctgagttccacatgtccatt
aagggatccttcaaggagcccagacaccagctggtggaggttatcgggcagctggaagag
agccttccggagcgcatgaaggaagagctgtctgctctcaccagagagggtcagggcggg
cccgagaacgtttcggtcgacgtaaagaaagtccacacctccgggggtaggtccgtgacc
ttggttgccgaagtcaacctctcgagaaccgtggatgccgatcagttagacctggaggag
ctgagcaaagacgaagccagtgaaatcgagaaaaccgtggagtcagtggtacgagacagt
ttggccaggcggcacagcccggcgcctggaagcccagacggggagaccgcagaggagccc
ccggctgccggctttcgcttcaagcgctgggccacccaggaactgtaccgccccggcggt
gaggagggcgatgccagccgggcctctcagggcacagagcaggtcgcttccccaggtccg
gtgtcagccacggtagaagtcaccagcccgaggggctttgcccagtcacacgtggtagag
gacgtaagccggtctgtcaggcgtgttaaagtagaccccactgggatttggaggactgag
caagtctcacgagaaggacccactgcacaagtggtggaggtaagtggggaaggggaccta
agtccggccctgagctcgccaggagccacctggtctgtgaggcacttcaccctgagtcct
gatcaaagtcaagtgtcccaggaagtcttcttccaaaggtctgtccctgcctttcgggag
gcagggggcacagaagagcctggcctgtccacagatatggacacagcggggaggcgcagt
gtgtttggttccgaacaatttcatgctgaaagggaaattgcttttcagggccccatttct
gggtcggggaaggttggcaattattttcaaacagaagagtcangtacccagacttctgta
aaggaccttcaggtgggccccagagaggggttcggggagcagatccagttcagagccctc
ctttcagacagaagggcgttgagtatcagggaagcttccgtgagcactgaagagtggtca
ggggacggcacatccatcaggcaggtcacggtctgggctcaggagcatcagactactgag
cacatagttnncccctgcccccgggaattcagccactcagaaagcagtgcccatggagag
ggcttggcagacgtgagccaggctgcgcgtagttccgctgtgggtgggaggatcctgatg
accggaaagagcaccttccaaagtgccagttcccagtggcctcaggaggccagtgtggga
gatgcacgaggggcagaggagacaccgggcatgagcagagcctttaggcacatttgtctg
ggtcccgcagagaccacagcctctgaacgggttgtcttccacgagcccgtttccaaatcg
cttgcacctgccggttcagcgggctcccctgagctaggcgagttggcagacggcagcggg
gtgctcaggcacgtggcacggggccccaaagactctctgtttacctttcagatggacata
agtcacgtggaggcgagcccccgctggacgcaagacaccacggtcttcttccccgcaggg
acggaagcagtggctcgtggtgcccctgaccgtggtgcctggagagacgggggcagtggg
aatgcctgggtggccagcgtgagctttcagggctcttccggggacggacaccaggtcccc
ggggaacagggcaaggcgcaggctgagtttgacaggacggtgcagctacagaggatggta
gaccaaaggtcggtgatttcggatgaaaagaaagttgccctcctctatctagacaatcag
gaggaggacaatgagggccactggttttga
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integrated database retrieval system