Acinonyx jubatus (cheetah): 106977079
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Entry
106977079 CDS
T04657
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju03022
Basal transcription factors
aju03420
Nucleotide excision repair
aju05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106977079
09124 Replication and repair
03420 Nucleotide excision repair
106977079
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
106977079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aju03021
]
106977079
03400 DNA repair and recombination proteins [BR:
aju03400
]
106977079
Transcription machinery [BR:
aju03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106977079
DNA repair and recombination proteins [BR:
aju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106977079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
106977079
NCBI-ProteinID:
XP_014930063
UniProt:
A0A6I9ZTR7
LinkDB
All DBs
Position
A1:134443049..134478355
Genome browser
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKATKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSGSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSSTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEHNGERFCYGCQGELKDQHVYVC
AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPTSSGI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaacctgaaagaactaagcgatgggaaggaggctatgaaaggacatgggag
attcttaaagaagatgaatcaggatcacttaaagctacaatagaagatattctcttcaaa
gcaaagagaaaaagagtgtttgagcaccatggacaggttcgacttggaatgatgcgtcat
ctttatgtggtagtagatggatcaagaacaatggaagaccaagatttaaagccaaataga
ttgacttgtactttaaagttgttggaatacttcgtagaagagtattttgatcaaaatcct
attagtcagattggaataattgtaacaaagagtaaaagagctgaaaaactgaccgaactc
tcaggaaacccaaggaaacacattacatctttgaagaaagctgtagatatgacctgccat
ggagaaccatctctctataactcattaagcatggctatgcaaactctaaaacacatgcct
ggacatacaagtagagaagtgctaatcatctttagcagcctcacaacttgtgacccatct
aatatctatgatctaatcaagaccctaaaggcaactaaaattagagtgtctgttatcgga
ttgtctgcagaggttcgggtttgcactgtacttgctcgtgaaactggtggcacataccat
gttattttagatgaaagccattacaaagaattgctgacacatcatgtcagtcctccacca
gctagctcaggttctgaatgctcacttattcgtatgggatttcctcagcataccattgct
tctctgtctgatcaagatgcaaaaccctctttcagcatggcgcacttggatagcagcact
gagccaggacttacattaggagggtatttctgcccacaatgtcgagcaaagtactgtgaa
cttccagttgaatgtaaaatctgtggtcttactttggtgtctgctccccatttggcacgg
tcttatcatcatttatttcctttggatgcttttcaagagattcctctagaagaacataat
ggagaaagattttgttatggatgtcagggggaattaaaagaccagcacgtctatgtttgt
gctgtgtgccaaaatgttttctgtgtggactgtgatgtttttgttcacgattctctccac
tgctgtcctggctgtattcataagattccaacttcttcagggatttga
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