Acinonyx jubatus (cheetah): 106985022
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Entry
106985022 CDS
T04657
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju04120
Ubiquitin mediated proteolysis
aju04137
Mitophagy - animal
aju04141
Protein processing in endoplasmic reticulum
aju05012
Parkinson disease
aju05014
Amyotrophic lateral sclerosis
aju05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106985022 (PRKN)
04120 Ubiquitin mediated proteolysis
106985022 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106985022 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
106985022 (PRKN)
05014 Amyotrophic lateral sclerosis
106985022 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
106985022 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aju04131
]
106985022 (PRKN)
04121 Ubiquitin system [BR:
aju04121
]
106985022 (PRKN)
03029 Mitochondrial biogenesis [BR:
aju03029
]
106985022 (PRKN)
Enzymes [BR:
aju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
106985022 (PRKN)
Membrane trafficking [BR:
aju04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
106985022 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
106985022 (PRKN)
Xenophagy
Other xenophagy associated proteins
106985022 (PRKN)
Ubiquitin system [BR:
aju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
106985022 (PRKN)
Mitochondrial biogenesis [BR:
aju03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
106985022 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
106985022
NCBI-ProteinID:
XP_014938730
UniProt:
A0A6J0A6E0
LinkDB
All DBs
Position
B2:6089888..7420093
Genome browser
AA seq
462 aa
AA seq
DB search
MIVFVRFNSSHGFPAEVDSDTSIFQLKEVVAKRQGVPADLLRVIFAGKELRDDLTVQSCD
LDQQSIVHVVLRPWRKGPEREGGDGPQNALEGSRREPESLTRVDLSSSVLPAHSVGLAVI
LNNDREETLPAGRPAGRPPYNSFYVYCKGPCQRIQPGKLRVRCGTCRQATLTLAQGPSCW
DDVLIPNRMTGECQTASCPGTTAEFFFKCGAHPTADKETSVALNLITTNSRGITCITCTD
IRSPVLVFQCNHRHVICLDCFYLYCVTRLNDRQFTHDPQLGYSLPCVAGCPNSLIKELHH
FRILGEEQYNRYQQYGAEECVLQMGGVLCPHPGCGAGLLPEPGRRKVTCEGGNGLGCGFV
FCRDCKEAYHEGECSTLFEASGAVSQAYRVDEKAAEQARWEEASKETIKKTTKPCPRCHV
PVEKNGGCMHMKCPQPQCRLEWCWACSCEWNRACMGDHWFDV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtcaggttcaactccagccatggtttcccagcggaggtcgattctgac
accagcatcttccagctcaaggaggtggttgctaagcgacagggggttccagctgacctg
ttgcgtgtgattttcgccgggaaggagcttagggatgacttgactgtgcagagctgtgac
ctggaccagcagagcatcgttcatgttgtgctgagaccctggagaaaaggcccagaaagg
gaaggaggtgacggcccacaaaacgccctggagggctcgaggagagagcctgagagcttg
acccgtgtggacctcagcagctcggtcctccctgcgcactcggtgggtctggctgtgatc
ctgaataatgaccgtgaggagaccctgccagctggaaggccagcaggtagaccgccttac
aacagcttttacgtttattgcaaaggcccctgccaaagaatacagccaggaaaactcagg
gtgcggtgtggtacctgccgacaggcgacgctcaccttggcccagggtccatcttgctgg
gacgatgtcttaatcccaaaccggatgactggtgaatgtcaaactgcaagctgtcctggg
actacagccgaatttttctttaaatgtggagcacacccaaccgctgacaaggaaacatca
gtggctttgaacctgatcacaacaaacagtcgaggcatcacctgcataacatgtaccgac
atcaggagccctgtgctggttttccagtgcaaccatcgtcacgtgatttgcttagactgt
ttctacttatactgtgtgacaagacttaacgacaggcagtttacccatgaccctcagctg
ggctactctctgccgtgtgtggctggctgccccaactccttgattaaagagctccatcac
ttcaggatccttggagaagagcagtacaaccggtaccagcaatatggcgctgaagagtgt
gtgctccagatggggggcgtgctgtgccctcaccctggctgtggagcagggctgcttccc
gagccaggcaggaggaaggtcacttgtgaagggggaaatggtctgggctgcgggttcgtc
ttttgccgggactgtaaggaagcgtaccatgaaggtgaatgcagcaccctgtttgaagcc
tcaggagcagtttctcaggcctacagagttgatgagaaggccgcggaacaagctcggtgg
gaagaggcctctaaagaaacaatcaagaaaaccaccaagccctgtccccgttgccatgtg
ccagttgaaaaaaatggaggatgcatgcacatgaagtgcccgcagccccagtgccgtctg
gagtggtgctgggcctgcagctgcgagtggaaccgcgcctgcatgggggaccactggttc
gacgtgtag
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