Advenella kashmirensis: TKWG_04880
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Entry
TKWG_04880 CDS
T02117
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aka
Advenella kashmirensis
Pathway
aka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TKWG_04880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aka03400
]
TKWG_04880
Enzymes [BR:
aka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TKWG_04880
DNA repair and recombination proteins [BR:
aka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TKWG_04880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_30
AAA_16
zinc-ribbons_6
T2SSE
CDC48_2
AAA_22
AAA_19
zf-IS66
HypA
Motif
Other DBs
NCBI-ProteinID:
AFK61495
UniProt:
I3U907
LinkDB
All DBs
Position
843416..845467
Genome browser
AA seq
683 aa
AA seq
DB search
MQVSWVRVVLDIPRQEAFDYRCEHPVQKGQRVIVPFGSRQLIGVVIELLPAPAFDPEQIR
DVEQVLDDLPALSASWLALAQFASRYYQRSLGEVILPVLPNGLRKPTAYLGKRSAGGPVA
RADRKKRGTVAPALASPIVLNAQQQHAVQKISQSDGYAAYLLHGVTGSGKTEVYLHAALT
FLQRGQQILMLVPEINLTPQLETAVRARFADIVAPDEIAVFHSGLADGERIKAWADAQRG
KLKVLLGTRMAIFAPLDNPGLIIVDEEHDASYKQQEGLRYSARDLAVWRAHHAGIPLVLG
SATPSLETWHHALSGRYTRLTLEQRARTRFLPDIRLVDTRKAKLNQGFEPSVLEAIRSRL
ERGEQSMVFLNRRGYAPVMHCAACGWVSQCPRCSVHTVLHRTPGSGYQLQCHHCGFHSRV
PSICPDCGNQDLQPLGRGTQRVEEFLQEAFPAARIQRIDADSTRLKGSALRLFDEVHTGN
IDILVGTQMVAKGHDFKRLGLVAVLNADSMLFSADFRAPERLFAQLLQVAGRAGRHAEGG
QVLIQTGYPDHTVYQTLLNNDFPAFADDLLAERQDTGLPPFTFQALITAEAKSVQLALAF
LDEIRALAASFLSGEGESEVVRLYDPVPLRILRVAHVERAQLLVESASRPALQRFLQQWL
PQVQTIGQKQRMRYFIEVDPLEI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagtcagctgggtccgtgtcgtgttggatattccccgacaggaggcattcgactat
cgatgcgagcatccggtgcaaaaagggcaacgcgtcattgtgccctttggctcgcgacag
cttatcggcgtggtcatcgaattattgccagcacccgcgttcgatccggagcaaatccgc
gatgtggagcaggtgctggatgatctccccgcgctctctgcttcctggctggccctggcc
caatttgcgtcgcgttattatcaacgctccttgggtgaggtcattctgccggtattgccc
aacggattgagaaaaccgactgcctatctgggtaaacgatccgccggcggcccggtagcc
cgagccgatcgtaaaaaacgcggcacggtcgctccggcgctggcctctccaatcgtattg
aatgcccagcagcaacatgccgtgcagaaaatatcccagtcagacggctatgctgcctat
ttgctgcatggggtgactggaagcggcaaaacagaagtgtatctgcacgcggcgctcact
ttcttgcagcgagggcagcagatattgatgctggtcccggaaattaacctgacgccacag
ctggagacggctgtacgggcgcgttttgcagatatcgtggcacccgatgaaattgccgta
tttcacagcgggctggccgatggcgagcgcatcaaggcctgggcagacgcccagcgcggc
aaactcaaggtgctgctgggcacccgcatggccatttttgcgccgctggacaatcccggc
ctgattattgtcgatgaggaacatgatgcttcatacaagcagcaagagggcttgcgatat
tcggcgcgcgatctggcggtgtggcgcgcacatcacgccggtattccgctggtgctggga
tcggctacgccctcgctggagacctggcatcacgcactcagtggccgctatacccgatta
accctggagcagcgcgccagaacccgttttctgcccgatatccgtcttgtcgatacccgg
aaggctaaacttaatcaggggttcgagcccagcgtgctggaggccatccgcagcaggctt
gagcgcggtgaacagtccatggtgttcctgaaccgtcggggctatgcccctgtcatgcat
tgcgccgcttgcggctgggtcagccagtgcccgcgctgttcggtgcatacggtattgcat
cgcacccctggcagcggctatcaattgcaatgtcaccactgcggtttccacagtcgtgtt
ccgtccatctgccccgattgcggcaaccaggatttgcagcctctggggcgcgggacccaa
cgggttgaagagtttctgcaggaagcgtttcccgcagcgcgcatccagcgcattgatgca
gacagcacacgcctcaagggcagtgccctgcggctatttgatgaggtgcataccggcaat
attgatattctggtcggcacgcaaatggtggcaaaggggcatgacttcaagcgtctgggc
ctggttgctgtgctcaatgccgactccatgctgttttccgccgattttcgtgcccccgag
cgcttgtttgcccagctcttgcaggtggccggccgggcagggcgtcatgcggaaggaggt
caggtgctgattcaaaccggctatcccgaccatacggtctatcagacgttgcttaacaac
gacttcccagcgtttgccgacgatctgctggctgaacgccaggataccggcttgccgccc
tttacctttcaggccctcattaccgccgaggccaaaagcgtgcaactggcgctggccttt
cttgatgagatccgggcgctcgcagcttcgttcttatctggcgagggcgaatccgaggtt
gttcgtctttatgatcctgtccccttgcggattctgcgcgttgctcacgtggagcgggca
cagttgctggtcgaatcggcatcaaggccagcgttgcagcgttttctgcagcagtggctg
ccacaggtccaaacaatcggacaaaagcagcgcatgcgttatttcatcgaagtagaccca
ctggaaatctag
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