Apis laboriosa (Himalayan honeybee): 122715240
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Entry
122715240 CDS
T07817
Name
(RefSeq) DNA ligase 4-like isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
122715240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alab03400
]
122715240
Enzymes [BR:
alab01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
122715240
DNA repair and recombination proteins [BR:
alab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
122715240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
RNA_ligase
DNA_ligase_IV
BRCT_2
Putative_G5P
mRNA_cap_enzyme
Tra_M
Motif
Other DBs
NCBI-GeneID:
122715240
NCBI-ProteinID:
XP_043793206
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MNFNKRSEMNTTLAGKIEFKELCNVLEEVSKTRNTTKKADILDQFIKKCRIMSHKLKTEF
PDMDISFFPILKLILPNLERRHEAYNLKEKSLADLYIRVFCLGKDSKDAKNLKQYKAPVA
KKIAGCKKAEKDFAEKACYILQNRLSSKNSDFTLERINLFLNNISLKNNRKDEIFKFLLE
KTNALEFKWITRIILKNLRLGITSKKILQVFHPDANSLFDVSSNLQHVCETLCDPQLRYH
CDIQVFSHFKPMLLERYQIENIEKLFNEKEQYFVQCKYDGERSQMHMKDGKYKYFTRQGY
DITNYSGFGETSSLGFMSSVFDRLLNQEVKSVILDGELMGWHKEKKLLGSKGMNYDVKKL
SENSHYQPCFVAFDIIMHNDILVNNEPYEERLKILKNIFKEEEGHLLLCESIKVSKSEEL
CNIFNESIKNKEEGIVVKKCDSKYKPNIRDGTGCYKIKAEYSEDLVQDIDLIILGGYYGD
GKFIGLIKSFLMGVASSPKTPGENPTEFLSVVSVSNGLSMDALKELWKIFENKWQSERPT
NVIPPKIDPPELWIRPENSIILTVKATEMTRSSDYPTRYSLRFPRVTNIRTDKPWYNVCT
TNNLKSLIKNTWPIQKLTKRQINYEDIEVPETKISKTKKYYSRIKNEQILIKPNIFVDPS
IQLTRLFDDKEICVINGNDELPKERIEEILLQHGAKVVQNPLKENYCVIIGNVKTIKANN
IIQNNNIHKKYDIVTLDWFKRVTKEENWSSLQDFLPWDLICSRESTRQRLAQYYDDYYDH
YTIDANEETLLRSFKKLEETEKNTKFDYTEMNKINQELFDNEISPYSLFCGIIGYFNDPS
DLSKFEFRFMGGTIKETIDDSITNIFINNNYISTELQNLIGNKLQMLTIIKSEWIEECFK
QNAIIPHSKYLIQ
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaataaaagaagtgaaatgaatacaacattagctggaaaaattgaatttaaa
gaattatgtaatgtattggaggaagtttctaaaacacgtaatactaccaaaaaagctgat
attttagaccaatttattaaaaaatgtcgtattatgagtcacaaattaaaaacagaattt
ccagatatggatatttcattttttcctatattaaaattaattttaccgaatcttgaacga
agacacgaggcatataatttaaaagaaaaatctctcgctgatctttatattcgtgtattt
tgtttgggaaaagatagtaaggatgcaaaaaaccttaaacaatacaaagctccagttgca
aaaaaaatcgcaggatgcaaaaaagctgaaaaagattttgcggaaaaagcatgttatatt
ttgcaaaatcgtttatcatccaaaaattctgattttactttagaacgaattaatttattt
ttaaataatatatcgttaaaaaacaatcgaaaagatgaaatatttaaatttttattagaa
aaaacgaatgcattagaattcaaatggataacacgaattatcctaaaaaatttaaggctt
ggtattacgtcgaaaaaaatattgcaagtttttcatccagatgcaaattcattatttgat
gtatcatctaatttgcaacatgtttgtgaaacattatgtgatccccaattaagatatcat
tgtgacattcaagttttttctcattttaaacctatgttattagaacgatatcagattgag
aatatagagaaactttttaatgaaaaagaacaatattttgtacaatgcaaatatgatggt
gaacgatctcaaatgcatatgaaagatggaaagtataaatattttacacgacaaggatat
gatattacaaattattctggttttggggaaactagttctttaggttttatgagtagtgta
tttgatcgattattaaatcaagaagtaaaatcagtaattttagatggtgaattaatgggt
tggcataaagaaaagaaattattaggctcaaaaggaatgaattatgatgttaaaaaactg
tcagaaaatagtcattatcagccatgttttgtcgcatttgatattattatgcataatgat
atattagttaataatgaaccttatgaagaaagacttaaaattttaaaaaatatatttaaa
gaagaggaaggtcatcttttattatgtgaatctattaaagtttccaagagtgaggaatta
tgtaatatatttaatgaaagtattaaaaataaagaagaaggaattgtagtaaaaaaatgt
gatagtaaatataaaccaaatataagagatggtactggatgctataaaataaaagctgag
tattctgaagatttggtacaagatatagatttaataatacttggtggttattatggggat
ggaaaatttataggtttaataaaaagctttttaatgggagtagcttcatcaccaaaaact
cctggtgaaaatcctacagaatttttatctgtagtatcagttagtaatggtttatctatg
gatgcattgaaagaactctggaaaatatttgaaaataagtggcaaagtgaacgccctacg
aatgtaattcctcccaagatcgatccgccagaattatggattcgccctgaaaattctatt
atcttaactgtaaaagcaacagaaatgacacgaagttctgattatccaacgagatacagt
ttacgatttcctagagttacaaacattagaactgataaaccatggtataatgtttgtaca
actaataatttgaaatcattaattaagaatacgtggccaattcaaaaattgacaaaaaga
caaataaattatgaagatatagaagtacctgaaaccaaaatatctaaaacaaaaaaatat
tactcaagaataaagaatgaacaaatattgataaaaccaaatatttttgttgatccatca
attcaacttacccgactttttgatgataaagaaatttgtgtaataaatggcaatgacgaa
ttgcctaaagaacggattgaagaaattcttttacaacatggagcaaaagttgtacaaaat
cctttaaaggaaaattactgtgttataattggtaatgttaaaacgataaaagcaaataat
attatacaaaataataatatacataaaaaatacgatatagtaacattagattggttcaaa
cgggttaccaaagaagaaaactggtcatcattgcaagatttcttaccatgggatttgata
tgcagtcgcgaatcgacaagacaacgattagcacaatattatgatgattattatgatcac
tataccatagatgctaatgaagaaactttacttcgttcgtttaaaaaattagaagaaacg
gagaaaaatactaaatttgattatacagaaatgaataaaataaatcaggaattatttgat
aatgaaatatctccttattctctattttgtggtattataggatatttcaatgatccatca
gatttgtcaaaatttgaatttcgatttatgggtggaactattaaagaaactatcgatgat
tcgataacaaatatctttattaacaataattatatcagtactgaacttcaaaatttaatt
ggcaataaattacaaatgttaacaattattaaaagtgagtggattgaagaatgttttaaa
caaaatgcaattattcctcactctaagtatctgattcaataa
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