Apis laboriosa (Himalayan honeybee): 122718331
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Entry
122718331 CDS
T07817
Name
(RefSeq) uncharacterized protein LOC122718331 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122718331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alab03021
]
122718331
03019 Messenger RNA biogenesis [BR:
alab03019
]
122718331
Transcription machinery [BR:
alab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122718331
Messenger RNA biogenesis [BR:
alab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
122718331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_helical
CID
CFIA_Pcf11
Motif
Other DBs
NCBI-GeneID:
122718331
NCBI-ProteinID:
XP_043799216
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MTSTKSKEIADEYISSLSDLTINSKPLINMLTMLAEDNIEHAPAIVQAVENHLQKVRSEI
KLPVLYLIDSIVKNVNGAYLNLFTQNIVNTFCGVFEKVDENTRASMWKLRQTWNDVFPAK
KLFSLDVRVQSIDPAWPITASPTSVSSGSIHVNPRFFSMPQQSATSIVSQPIVAPVKLPP
GDPVTPTEAAMREQLLKKQRELIELQKKKIELELLQAKANLEQQQRQLDKQAGNLKAELV
TVTTHITSSTETITQGKLVATTVPSQAPKQVAKQFPAATASLLKNAGINNGPRIAPASSI
AVASAKPVSRDPRLKTTSVQDISVSSVDPRQRISTPTQKDSRGEAQAQLAANTNTVLSDQ
LKQQILSKQAVTSTINKSPTNLAGSDTATLNASNNNNANTNLNNNNNNKNFSGNANKDAV
SHRTSQKKDPRLSSNSSGNLNSNSSKGSQNLSVGSNSSLSVSNRGGGSNDSKSKDSKISN
SRSSSSSTIDKSSASSKSSHRKVGNKSRSKQPQTSPSKIPKVDRDASPVRSKSREKDSGD
SSPSSRTSPQSFQTCKNRKKNTKSRKRSPSPPYRIPRRNDAKSNSVLNNSGGVTEEEQSG
SLIVSPPHPPTFKEIRPNARQRNYVRRNKDGSLSPERSPANAGNVQTTVEPTVESSSKDE
DLRATLPLPGAATSVLEKKEDLDLRVLPPPVNTNKRQTSEHMESALAKKTKAEKFDALFG
NEDVDLRTLTHPKAGRPPTPPPPVISGEDGKDSWAKLKTPSKNDREKQANNNDDKRDNRD
RNRDRLGRLRLYNKLPDDPKERRRTLSNEDQDNRSGRRGRENDKPEKNEDRNIEIIMKQA
AEQLNQGTITKTQYNTLIQEVLHMSEDRKLRAAQRKEKEVGSIVWEKGVNLDITGSSDRT
STFSPSADKEMIRNKDHPIARNPNGPRWQTQPWQQPGPWAHPPGPPYGGPQGHFNSDFRP
VGPWQNPRHFGPMRPDYQYHGGFNHTMGPNPRLGPGMMGPIGPNGPLMSNLLPNGPIGPM
GNPPMSLSGMNGPGMIMNNGPMTNLISNPNMSLNASRNVSPSSSSKYDLEDSDQNYTTTM
IKNPNPHSRELPPPDPKLLDEIARDTMKSIDIDIQHIPREIRYYGQTGVVFMNWDDPREI
GFQDGIRRVLIDDKITITCAFNDQYKEFIYEGEVHRIKLGAPTRELYIDDKWYECYFGGM
PVTVDLGGKKVSVKLEGPPPLVKIGTVKRTDLVVAKINLIINARNMVPVFLDAKPQIFEI
EGKPHTLEFIDSLQTVLLNGRPFKVEFGGLPKPIIVRDKKHFIRFSVLPRGVRPGYVKIA
GMKGEEPIEAPPTPPLLTQKPKVDTASTPTQFSAVEHESTSQDGSDLRSTPKPDLQLDML
SSALPSAMAPSSGLSYQAEPAENPPAAAPPLSLPLNMNELFQRLVETGIVSNLSEQKKQE
EEEKKEPEIIPVSFDKPETLKVKQPAIAAALYSGMQCSSCGARFAPELATRYSHHLDWHF
RQNRRERDSARKAHSRPWYYDVSDWIQFEEIEDLEDRVQSWFETEKQTADTEGITAEDSP
QEAAQPSVPTGTDEDSRCQVCHDAFEQFYNEEKEEWHLRPAINFEGKNYHPLCLDDYKEK
SLVRALEKSALALEETIEEMEDEKKESSDETFIEDNKTDELSVEALNTEFEIIEPSNDVI
EDNVSEEPAERDNKEEETIIEDNIDCIEQNEKIEEQELEYNNKEDLDIESIEKENIETEI
PETENVDKSFKNIKIKEEPIDEPEEQLEEEHFDFTNIEIKEEPIEPEPDPEESIITEPAT
VDTTYAAVKSSIDGNVELDSTPAAIPTAPSRIKINITKPLCINKEPEESKEKEKSIIETS
TEEIIEPLVPASIKPALQGRKLSNLPPVERGQELSGLCSIM
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaacaaaatctaaggaaatagcagatgagtacatctcatcattgtctgatttg
acgatcaacagtaaaccattgattaatatgcttactatgctggctgaagataatatagaa
catgcaccagctattgttcaagctgttgaaaatcatttgcaaaaggtgagaagcgagatc
aaattacctgttctttatttgattgattcaattgtgaagaatgttaatggagcatatttg
aatctcttcactcaaaatattgtaaacactttttgtggagtatttgaaaaggtggatgag
aatacacgagctagcatgtggaaattaagacaaacctggaatgatgtatttccagcaaag
aaattattttctttagatgtacgagtgcaaagtattgatcctgcctggccaatcactgcc
tctcccactagtgtttcttcgggatctattcatgttaatcctcgttttttttcaatgcct
caacaatcagcaacatctattgtttcacaaccaattgtagcacctgttaagcttccacca
ggtgatccagtaacacctacagaagcagcaatgcgagaacaattattaaaaaaacaacga
gaattgatagaattgcaaaagaaaaaaattgaattagaattacttcaagctaaagctaat
ttagaacaacaacaacggcaacttgataaacaagctgggaatttaaaagctgaactggtg
acagttacaacgcatattacatcaagcacagaaactatcacacaagggaaacttgttgca
actactgtgccaagccaagcacctaaacaagtagctaaacagtttccagcagcaacagct
tcgcttctaaaaaatgcaggaataaataatggtccacgaattgcaccagctagtagtata
gcagtggcatcagctaaacctgtatctcgtgatccaagattaaagactacttcggttcaa
gatatatcagtttcaagtgtggatcctcgtcagcgaataagtacaccaactcaaaaggat
tcgcggggtgaagcccaagcgcagttagcagcaaatacaaacactgtactttcagatcaa
ttaaaacagcagatactttcgaaacaggctgtgactagcactatcaacaagtctccgaca
aatcttgccggctccgatactgcgacattaaacgctagtaataacaataatgctaatacg
aacctcaacaataataataataataaaaatttcagtggtaacgcaaataaagatgctgtg
tcgcatcgaacaagtcaaaagaaagaccctcgattgtctagtaatagtagtggtaaccta
aacagtaatagttccaaaggttctcaaaatctatctgtgggtagtaatagttctttatcc
gtgagtaatagaggaggtgggagtaacgattctaagtcgaaagattcaaagatttcgaat
tctcgaagttcttcgtcgtcgacgatcgataaatcttccgcttcctcgaaatcctcgcat
agaaaagtaggtaataaatcgcgatctaaacaacctcaaacatctccgagtaaaatacca
aaagtcgacagagatgccagtcctgttagatccaagtctcgtgaaaaagacagtggagac
agttcaccatcttcgcgtacctctcctcaatcctttcaaacctgtaaaaatcgaaaaaag
aatacaaaatcgagaaagcgcagtccaagccctccatatagaattcccaggcgtaatgat
gcaaaatccaattcagttctaaataattctggtggtgttactgaggaggagcaatctggt
tcattgatagtctctcctcctcatccacctacatttaaagaaatcagaccaaatgctaga
caaagaaattacgtaaggcgtaataaggatggcagtcttagtcccgaacgctctccagca
aatgctggaaacgttcaaactactgtggaaccaactgtggaatcatccagcaaggatgaa
gatttgagagcaactctacctcttccaggtgcagccacttcggtattagaaaagaaagag
gacttagatttacgtgtattgccaccaccagttaataccaataaaagacaaacttcagaa
catatggaatctgctttagcaaagaaaacaaaagctgaaaaatttgatgcattatttgga
aatgaagatgttgatttacgaacattgactcatcctaaagctggacggccacctacacca
cctccacctgtaatatctggtgaagatggtaaagatagttgggcaaaattaaaaacaccg
tcaaagaatgatagagaaaaacaagctaataataatgatgataagcgggataacagagat
cgtaacagagataggttgggtagactcaggctttataacaaacttccagatgatcctaaa
gaaagaaggagaacattatcgaatgaagatcaagataatagatcaggtcgacggggtcga
gaaaatgataaacccgaaaaaaatgaggatagaaatattgaaataataatgaaacaagct
gctgaacaattgaatcaaggtactattactaaaactcaatataatacacttattcaagaa
gttttacatatgagtgaagatcgaaaattaagagctgcacaacgaaaagaaaaggaagtt
ggttctattgtatgggaaaaaggtgtaaatttagatataacaggttcatcagatcgtaca
tctacattcagtccttctgctgataaagaaatgattagaaataaagatcatcctattgca
agaaatccaaatggtcctagatggcaaactcagccttggcaacaaccaggaccatgggct
catccacctggacctccatatggtggtcctcaaggacattttaattcagattttagacca
gttggtccatggcagaatccaagacatttcggtccaatgcgaccagattatcaatatcat
ggtggctttaatcatactatgggtccaaatcctcgtttaggacctggaatgatgggacct
ataggaccgaatgggccgcttatgtcaaatttattacctaatggcccgatcggacctatg
ggtaatccacctatgtcattatctggaatgaatggacctggaatgataatgaacaatgga
ccaatgacgaatcttatatcaaatccaaatatgtctttgaatgcttcaagaaatgtatca
ccaagttcatcctcaaaatatgatcttgaagatagtgatcaaaattataccacgacaatg
ataaaaaatccaaatcctcatagtcgtgaattaccaccaccagatccaaaattattggat
gaaattgcaagagatactatgaaatctatagatatagatatacaacatataccacgtgaa
attagatattatggtcaaactggagttgtttttatgaattgggacgatccaagagaaatc
ggatttcaagacggtatacgacgagttttaatcgacgataaaatcactataacttgcgca
tttaatgatcaatacaaagaatttatttatgaaggtgaagttcatcgaattaaattgggt
gcgccgacgagagaattatatattgatgataaatggtatgaatgttatttcggtggtatg
cctgtaacagtagatcttggtggtaaaaaggttagtgtcaaattagaaggacctccaccc
cttgttaagattggtactgtaaagagaacagacttagtagttgccaaaattaatcttatt
attaatgctcgtaatatggttcctgtatttttagatgcaaaacctcaaatatttgaaatt
gaaggaaaacctcatacgcttgaatttatagattcattacaaacagttcttttaaatgga
cgaccatttaaagtagaatttggaggattgcctaagcctattatagtcagagataaaaaa
cattttataagattttcggtattacctagaggtgtccgaccaggatatgttaagattgca
ggtatgaaaggtgaagaacctattgaagcaccacctaccccacctttattgacacaaaaa
ccgaaagtggatacagcttctacaccaacgcaattttctgccgttgaacatgaatcaaca
tcgcaagatggttcagatcttagatctactcctaaaccggatttgcaattagatatgtta
tcttccgctttgccttctgcaatggcaccatcatctggattatcatatcaagctgaacca
gcagaaaatccacctgcagctgctccaccattatcattgccattgaatatgaatgaattg
ttccagagattagttgaaactggtattgtatcaaatctctctgaacaaaaaaaacaagaa
gaggaagaaaagaaagaaccagaaattattccagtttcatttgataaaccagaaacactt
aaagttaaacaaccagctattgcagcagcattgtacagtggtatgcaatgtagttcttgt
ggcgctagatttgcaccagaattggcaactcgatatagtcatcatttagattggcatttt
agacaaaatagacgagaaagagattctgcaaggaaagctcattcacgaccttggtattat
gatgtaagcgattggatacaatttgaagaaattgaagatttagaagatagagtacaaagt
tggtttgaaactgaaaaacagacagctgatacagaaggtattactgcagaagattctcct
caagaagctgcacaacctagtgttcctactggaactgatgaagattctagatgtcaagtg
tgtcatgatgcatttgaacaattttataatgaagaaaaggaagaatggcatttaagacca
gcaattaattttgaaggaaagaattatcatccattgtgtctcgatgattacaaggaaaag
agtctcgtgagagctttggaaaaatctgcattagcgcttgaagaaacaattgaagaaatg
gaagatgaaaaaaaggagagctctgatgaaacatttatagaggataataagactgatgaa
ttaagtgtggaagcattaaatactgaatttgaaataatagaaccgtcgaatgacgtaata
gaagataatgtatcagaagaacctgctgaaagagataataaagaggaagaaactataatt
gaagataatatagattgtattgaacaaaatgaaaaaatagaagaacaagaattagaatac
aataataaagaagaccttgatatagaaagtatagaaaaagaaaatattgaaacagaaata
cctgaaacggaaaacgtggataaatcttttaaaaatattaaaattaaagaagaaccaatt
gatgaacctgaagaacaattagaagaagaacattttgattttactaatatagaaattaaa
gaagaacctattgaaccagaaccagatcccgaagaaagtataataaccgaacctgcaaca
gttgacacaacatatgctgctgtaaagagttctatagacggaaatgtagaattagattct
acacctgcagcaattccgacagcgccatctcgaattaaaattaatattacgaaaccatta
tgtattaataaagaacctgaagaatcaaaggaaaaagaaaaatctataattgaaacatct
actgaagaaataatagaacctttggtgcctgcttctattaaacctgctttacaaggtaga
aaactttcaaatttacctcctgtggaaagagggcaagagttatcaggactctgctcaatt
atgtaa
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integrated database retrieval system
