Acanthopagrus latus (yellowfin seabream): 119008225
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Entry
119008225 CDS
T08233
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119008225 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alat01002
]
119008225 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
alat00536
]
119008225 (shha)
Peptidases and inhibitors [BR:
alat01002
]
Cysteine peptidases
Family C46: hedgehog family
119008225 (shha)
Glycosaminoglycan binding proteins [BR:
alat00536
]
Heparan sulfate / Heparin
Morphogens
119008225 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
Vint
Hint_2
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
119008225
NCBI-ProteinID:
XP_036934174
EnsemblRapid:
ENSALTG00010015029
LinkDB
All DBs
Position
19:17169894..17178746
Genome browser
AA seq
413 aa
AA seq
DB search
MLLWTRIVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTNKAVKDLRTGDRVLAADDDGNPIYTDFIM
FIDQDSATKRLFYVIETDSGQKITLTAAHLLFVGHNSTDEERMSAIFASEVRRGQKVFVF
DAERSRLEPVTVKRIYTQEQVGSFAPVTVQGTVVVDQVLASCYAVIEDHVLAHWALAPVR
LAHWVSSLLFNSQNQVSAQSDGVHWYSKILYQLGTWLLDSHSIHPLGMSVYSS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatcgtattggtcggtctcatctgcttgtccttggtgtcctct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcatattcaaggatgaagagaacaccggtgccgacaggctaatgactcag
agatgtaaagacaagctgaactctctggccatctcggtgatgaatcagtggcccggggtg
aagctgcgggtcaccgagggctgggacgaggacggacaccacttcgaggagtcgctccac
tacgagggcagagccgtggacatcaccacctcggacagagacaagagcaagtacggcact
ctgtccaggctggcggtggaagccggattcgactgggtttattacgagtccaaagcccac
atccactgctcggtgaaagcagaaaactcagtggcagcaaagtcaggcggctgcttccca
ggctcctccaccgtcaccctgcaggatggcaccaacaaggcggtcaaggacctccgaacc
ggcgacagggtcctggcggccgacgacgacggaaacccgatttacaccgacttcatcatg
ttcatagaccaagactcggccaccaagaggctcttctacgtcatcgaaaccgactcaggc
cagaagatcaccctcaccgccgcgcacctcctcttcgtcggccacaactccacggacgag
gagcggatgtcggcgatcttcgccagcgaggtccggcgcggacagaaggtgttcgtgttc
gacgccgagcgcagccggctcgagcccgtgaccgtaaaacggatttacacgcaggagcag
gtgggctcctttgcgccggtgaccgtgcaggggaccgtcgtggtggaccaggtccttgcg
tcctgttacgcagtgatcgaagaccacgtcctggcgcactgggccctggcacctgtcagg
ctcgcccactgggtgtcctcgttgcttttcaattcccagaatcaagtgagcgcacagagc
gacggagtgcactggtactccaagatcctttatcaactcggaacatggctcttggacagc
cactcgatccatccacttgggatgtcagtatactcaagttga
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