Acanthopagrus latus (yellowfin seabream): 119008252
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Entry
119008252 CDS
T08233
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119008252 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
alat04050
]
119008252 (tnfrsf11a)
04090 CD molecules [BR:
alat04090
]
119008252 (tnfrsf11a)
Cytokine receptors [BR:
alat04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
119008252 (tnfrsf11a)
CD molecules [BR:
alat04090
]
Proteins
119008252 (tnfrsf11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
119008252
NCBI-ProteinID:
XP_036934216
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All DBs
Position
19:11207759..11225370
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AA seq
658 aa
AA seq
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MRPNFSTSWIVRGWITCVLVGFYAQNVVSKSLTCDEKHYEKNSRCCEKCEPGFRVYTHCT
DSQPTKCIRCSRGEYQPGWTEEMRCIQQKFCDPGKGFMTRPENPVAEEPCRCDAGLQCYP
INCEFCERIPTCSAGQGLEMDPDSTNGRKICVGCKKGFFSEVNSAGQCKPWTNCKAEGRS
ELQPGSAQADAICGPPVSPAPAPSWVIVSVLSVITVLCLLILLLFCYKDKLKLLSVNLRS
CVQNLKRTRIQQETLAPLYHSGAGGGGPGGPKCTPCETSKLICQAPHSPADETLCTFPTS
VPDVKVSLPLTEEEGTKGKTQTEAQSEGSGEPEEVSEDEEIASVSPLLAGSCVCIIPIRE
PLEVGENEDCSQAVSHGTAGTCSCGGLDGDESGKEEKSEIVRSDNSGEKGNGNLETAVSS
KCETGVTSLVSLSPPLLHTSAAIPPSSPELCLPLSQAQVRPEFKPHLSDRPLVKQEDFYR
LTSTDSTSTDNSAAFTMTSVSPLMTSSSVGDLYLDKPAEASSPEQGQGLSWGDSKGNKLS
SVESGLECTPESLHSQLADPTLTSGQVSGNHNTTFISSGQVMNFSGDVIVVYVSQTSLGS
DGAGQDDAFGSPVQEEANETAPFFQSCPRSQGDSVSQSTLQDETLPVQEVMEKRPLRK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgaacttttctacaagttggatagtccgaggctggataacgtgcgtcctcgtc
ggcttttacgcacagaacgtggtctccaaatctctcacatgtgatgaaaaacattatgaa
aaaaactcaagatgctgcgaaaagtgtgaaccaggcttccgtgtgtatactcactgcact
gattcccaaccgactaaatgtatcagatgcagtcgtggtgaataccagcccggctggact
gaagagatgcgctgtattcagcagaagttctgtgacccagggaagggtttcatgacgagg
cctgagaacccagtggcggaggagccgtgccgatgtgacgccggcctccagtgctacccc
atcaactgtgagttctgtgagaggatacccacctgcagcgccggacagggactcgagatg
gaccctgattctactaatggaaggaagatttgcgttgggtgtaagaaaggcttcttctct
gaggtcaacagcgctggacaatgcaaaccatggactaactgtaaggctgagggcaggagt
gaacttcagcccggcagcgctcaggccgacgcgatttgtggaccacctgtctcacctgct
ccagcgccctcctgggttatagtttctgttctgtcagtcatcactgttctgtgtctcctc
atcctgctcctcttctgctacaaggacaaactgaaattactctctgtgaatctgcggtcc
tgtgtccagaatctgaagagaactaggatacaacaggagaccctggcccctctttaccac
agtggagccggaggaggcggtccaggaggccccaaatgtacaccgtgcgaaacgagcaaa
ctcatctgtcaagcaccgcacagtccagctgatgagaccctttgtacattccccacctcc
gttcccgatgtcaaggtgtcgctgcccctcacagaggaagaagggaccaaggggaagacg
cagacggaggctcagagcgaagggtccggagaaccggaggaggtgtcggaagatgaggag
atcgcaagcgtgtctcccctgttggcaggttcttgcgtgtgcatcattcccatccgcgag
ccactggaagtaggggagaacgaggactgcagccaggccgtcagccacgggactgcaggg
acctgctcgtgtggagggctggacggagacgaaagtggcaaagaggagaaaagtgagatt
gtaaggtccgacaacagcggagaaaaggggaatggaaatctagaaactgcggtctcgtcc
aagtgtgagacaggtgttacatcacttgtctctctttctccgccgctcctccacacctcc
gccgcaatccctccatccagtcctgagctctgcctgccgttgtctcaggctcaggtgagg
ccggagttcaaacctcacctgagtgacaggccactggtaaaacaggaggatttttacagg
ctgacgagcacagactccacctccacagataatagcgcagccttcacgatgacctcggtt
agccccttgatgacttcctcatctgtcggagatctctacctggacaagccggctgaggcc
tcgagcccggagcaaggccagggactttcctggggggacagcaagggaaacaaactctct
tctgtggagtcaggactggagtgcacacctgagagcctccatagtcagctggctgaccca
actcttacctcaggtcaggtgtccgggaaccacaacaccaccttcatctccagtggtcag
gtgatgaacttcagcggcgacgtgatcgtcgtgtacgtcagccagacatctctaggcagc
gacggggcgggccaggacgacgccttcgggagccccgtccaggaagaggccaacgagaca
gccccgtttttccagagctgcccgaggtcacaaggggactccgtttcccaaagcaccttg
caagacgagacactgccagtccaggaagtgatggagaagcggccgctgcgcaagtga
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