Acanthopagrus latus (yellowfin seabream): 119010652
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Entry
119010652 CDS
T08233
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119010652
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119010652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
Gp58
PRP1_N
CEBP_ZZ
DUF445
zf-RING_6
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
119010652
NCBI-ProteinID:
XP_036938881
LinkDB
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Position
21:complement(27046992..27049433)
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AA seq
557 aa
AA seq
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MAQQNHQLDRAKFCCSVCLDPLKDPVTIPCGHSYCRNCIQSYWDKEDEKKTHSCPQCRQS
FTPRPVLVKSTMLADLVEELKKTGLQAAAADLCYAGAEDVACDVCTGRKLRAVKSCQVCL
ASYCEKHLQPHHEAAQFKKHKLMEPSEKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRHNIQQRIQDREEDVKLLQQEVEAINGSADKAVEHSE
KIFTQLIRLMEERRSDVKQQVRSQQETEVSRVKELQEKLEQEITELKRKDAELKKLSHTE
DHNQFLHNYPSLSALSESTHSSSINIRPLKYFEDVTAAVSELRDKLQNVLRDTWTNISLT
ETQVDVLLSNPQPEPKTRAGFLRYSREITLDPNTANTHLLLSEGNRKATYSQHQPYSDHP
DRFTSYLQVLSTETLTGRCYWEVEWREGGVGVAVAYKNISRAGNESEFGRKDTSWLLYCY
NNSYNFYHNKVRTPVSGPRSSRVGVYLDHSAGILSFYSVSDTMTLLHRVQTTFTQPLCAG
LRCFYTHGDSAEFCKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaaaccatcagctggaccgagcaaagttctgctgttccgtctgtttggat
ccactgaaggatccggtgactattccctgtggacacagctactgcaggaactgtattcaa
agctactgggacaaagaggatgagaagaaaacccacagctgccctcagtgcaggcagagc
ttcacaccgaggcctgtcctggtgaaaagcaccatgttagcagatttagtggaggagctg
aagaagactggactccaagctgctgctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagctgtcaagtcctgtcaggtctgtttg
gcctcttactgtgagaaacacctccagcctcatcatgaagctgctcaattcaagaaacac
aagctgatggagccgtcagagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgtactgatcagcagtgtatctgttatctctgctctgtggacgaa
cataaaggccacgacacagtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgacacaacatccagcagagaatccaggacagagaggaagatgtgaagctg
cttcaacaggaggtggaggccatcaatggctctgctgataaagcagtggagcacagtgag
aagatcttcacccagctgatccgtctcatggaggaaagacgctctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcagcactcagtgagtctacacac
tcatccagcatcaacatccgtcctctcaagtactttgaggatgtgacagcagctgtgtca
gagctcagagacaaactacagaacgtcctgagagacacatggaccaacatctcactgaca
gagactcaagtggatgttttactgtcaaacccacaaccagagccgaagaccagagctgga
ttcttaagatattcacgtgaaatcacactggatccaaacacagcaaacacacatctgtta
ttatctgaagggaacagaaaagcaacatacagtcaacatcagccttattctgatcaccca
gacagattcacttcatatcttcaggtcctgagtacagagactctgactggacgttgttac
tgggaggtggagtggagagaagggggagttggtgtagctgtcgcatacaagaatatcagc
agagcaggaaatgaatctgagtttggacgaaaggacacatcttggttattatattgttac
aataacagttataacttttatcacaacaaagtcagaactcccgtctcaggtcctcggtcc
tccagagttggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctct
gacaccatgactctcctccacagagtccagaccacattcactcagccgctctgtgctgga
ctacgatgtttttacactcatggagactctgctgagttctgtaaactcaaatag
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