Acanthopagrus latus (yellowfin seabream): 119010802
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Entry
119010802 CDS
T08233
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119010802
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119010802
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
SPRY
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_4
Prok-RING_4
Phasin_2
Gp58
PilZN
Motif
Other DBs
NCBI-GeneID:
119010802
NCBI-ProteinID:
XP_036939181
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Position
21:25478947..25481510
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AA seq
563 aa
AA seq
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MAEKGAQPDRETYSCSICLGPLREPVTIPCGHNFCMNCIKIRWDIEGKKKTYSCPQCRQS
FTPKPVLVKNTMLAVLLEELKKTGLQDAPADLCYAGPEDVASGVFTGRKLKALKFCQVCL
VFNCEQHLQPHLNSPTFVKKKNKQKKPPKKLQENICSRHDEVMKKFCRTDQQCISDLCSV
DEHKGHDTVSAAAERTERQRELEGSRHNIQQRIQDREEDVKLLQQEVEAINGSADKAVEH
SEKIVNEMIRLMQKKCADVKKRIKSKQQAEVSRVKELQEKLEQEITELKRKDAELKKLSH
TEDHNQFLHNYPSLSALSESTHSSSINIRPLKYFEDVTAAVSELRDKLWKLLNKKWTNVS
LSVSEVDVLLLQPEPKTRAGFKRYSQEMTLDPNTAHTQLLLSGGNRIATVTSKPQSYSDH
PDRFTECYQVLSTETLTGRCYWEVKWRGGGGYAAVAYKNISRAESWNECAFGCNAKSWAL
FWDNTGYTFLHNNVHTPVSGPLSCRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPL
YAGVRFYYSSGNKVAKVEFCTVK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaggagctcagccggaccgagagacttactcttgttcgatctgtttgggt
ccactgagggagccggtgactattccctgtggacacaacttctgcatgaactgtattaaa
atccgctgggatatagagggaaagaagaaaacctacagctgccctcagtgcaggcagagc
ttcacaccgaagcctgtcttggtgaaaaacaccatgttagcagttttactggaagagctg
aagaagactggactccaagatgctcctgctgatctctgctatgctggacctgaagatgtg
gccagtggtgtcttcactggcagaaaactgaaagcactaaagttctgtcaggtctgtttg
gtctttaactgtgagcaacacctccagcctcacttaaattctcctacctttgtaaagaaa
aaaaacaaacagaagaagccgcccaagaagctccaggagaacatctgctctcgtcacgat
gaggtgatgaagaagttctgccgtactgatcagcagtgtatctctgatctctgctctgtg
gacgaacataaaggccacgacacagtgtcagctgcagcagagaggactgagaggcagaga
gagctggaggggagtcgacacaacatccagcagagaatccaggacagagaggaagatgtg
aagctgcttcaacaggaggtggaggccatcaatggctctgctgataaagcagtggagcac
agtgagaagattgtcaatgagatgatccgtctcatgcagaaaaaatgtgctgatgtgaag
aaacggattaaatccaagcagcaagctgaagtgagtcgagtcaaagagcttcaggagaag
ctggagcaggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacac
acagaggatcacaaccagtttctacacaactacccctcactgtcagcactcagtgagtct
acacactcatccagcatcaacatccgtcctctcaagtactttgaggatgtgacagcagct
gtgtcagagctcagagacaaactatggaagcttctgaataagaaatggacaaatgtctca
ttgtcggtgtctgaagtggatgttttactgttacaaccagagcccaagaccagagctgga
ttcaaaagatattcacaggaaatgacactggatccaaacacagcacacacacagctgtta
ttatcaggggggaacagaatagcaacagtaacaagtaaaccacagtcttattctgatcac
ccagacagattcactgaatgctatcaggtcctgagtacagagactctgactggacgttgt
tactgggaggtgaagtggagaggaggaggaggttatgcagcagtcgcatacaagaatatc
agcagagcagaaagctggaatgaatgtgcatttggatgcaacgctaaatcttgggcactt
ttttgggacaatacaggctacacatttttgcacaacaatgtccacactcccgtctcaggt
cctctgtcctgcagagttggagtgtacctggatcacagtgcaggtattctgtccttctac
agcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctc
tatgctggagttcgcttttattattcctccgggaacaaagttgcaaaagttgagttctgt
acagtcaaatag
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