Acanthopagrus latus (yellowfin seabream): 119011274
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Entry
119011274 CDS
T08233
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119011274
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119011274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_10
zf-RING_5
Prok-RING_4
zf-RING_6
Gp58
NEXCaM_BD
Motif
Other DBs
NCBI-GeneID:
119011274
NCBI-ProteinID:
XP_036940142
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Position
21:complement(25872505..25875273)
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AA seq
558 aa
AA seq
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MAQQNNQLDRAKFCCSVCLDLLKDPVTIPCGHSYCRNCIQSYWDKEDEKKTHSCPQCRQS
FTPRPELVKNTMLADLLEELKKTGLQAAAADLCYAGPEDVACDVCTGRKLRAVKSCQVCL
VSFCEKHLQPHFEIPAYEKHKLVEPSEKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRHNIQQRIQDREEDVKLLQQEVEAINGSADKAVEHSE
KIFTQLIRLMAKRCSDVKQQVRSQQETEVSRVKELQEKLEQEITELKRKDAELKKLSHTE
DHNQFLHNYPSLSALSESTHSSSINIRPLNYFEDVTAAVSELRDKLQDVLRDTWTNISLT
VTQVDVLLSNPQPEPKTRAGFLRYSREITLDPNTANTHLLLSEGNRKATLMRDEQSYSDH
PDRFSVKFQVLSRESLTGRCYWEVEWRGRGVYVAVAYKNISGAGNSTHQFGYSDTSWMLD
CKKKFYKFVHNNIETPVSGPRSSRVGVYLDHSAGILSFYSVSDTMTLLHRVQTTFTQPLY
AGVGFCYNGSSAKFSELK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcaaaacaatcagctggaccgagcaaagttctgctgttccgtctgtttggat
ctactgaaggatccggtgactatcccctgtggacacagctactgcaggaactgtattcaa
agctactgggacaaagaggatgagaagaaaacccacagctgccctcagtgcaggcagagc
ttcacaccgaggcctgagctggtgaaaaacaccatgttagcagatttactggaggagctg
aagaagactggactccaagctgctgctgctgatctctgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagctgtcaagtcctgtcaggtctgtttg
gtttctttctgtgagaaacatcttcagcctcactttgaaatccctgcgtatgaaaaacac
aagctggtggagccgtcagagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgtactgatcagcagtgtatctgttatctctgctctgtggacgaa
cataaaggccacgacacagtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgacacaacatccagcagagaatccaggacagagaggaagatgtgaagctg
cttcaacaggaggtggaggccatcaatggctctgctgataaagcagtggagcacagtgag
aagatcttcacccagctgatccgtctcatggcgaaaagatgctctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcagcactcagtgagtctacacac
tcatccagcatcaacatccgtcctctcaactactttgaggatgtgacagcagctgtgtca
gagctcagagacaaactacaggacgtcctgagagacacatggaccaacatctcactgaca
gtgactcaagtggatgttttactgtcaaacccacaaccagagccgaagaccagagctgga
ttcttaagatattcacgtgaaatcacactggatccaaacacagcaaacacacatctgtta
ttatctgaagggaacagaaaagcaactttaatgagagacgaacagtcttattctgatcac
ccagacagattcagtgtaaagtttcaggtcctgagtagagagagtctgactggacgttgt
tactgggaggtggagtggagaggaagaggagtttatgtagcagtcgcatacaagaatatc
agcggagcagggaactcgactcatcaatttggatacagtgacacatcgtggatgttagat
tgcaagaagaaattttataaatttgtacacaacaatattgaaactcccgtctcaggtcct
cggtcctccagagttggagtgtacctggatcacagtgcaggtattctgtccttctacagc
gtctctgacaccatgactctcctccacagagtccagaccacattcactcagccgctctat
gctggagttgggttttgttataatggatccagtgctaagttcagtgaactcaaatag
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