Acanthopagrus latus (yellowfin seabream): 119017375
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Entry
119017375 CDS
T08233
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03022
Basal transcription factors
alat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119017375 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
119017375 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119017375 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119017375 (gtf2h4)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119017375 (gtf2h4)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119017375 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
119017375
NCBI-ProteinID:
XP_036949935
EnsemblRapid:
ENSALTG00010009598
LinkDB
All DBs
Position
3:complement(14680308..14689082)
Genome browser
AA seq
472 aa
AA seq
DB search
MMKLRVQLQCKNLHEYLRELSPEILDRLYNHPATCLAVYRELPSLAKNYVIRMLFLDQPL
PQAAVALWVKKDSQKDHDDCVSVLAGLRLWHSQQLQGGLQGYILNPVFKDNLRIALLGGG
KAWADDGSTLGPDRHARDIDSLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLVQAGLMK
SEAGEAPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGR
DYSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTTSSSSSSTPSSS
SSSCNLSSTPGAGDAGYIVVETNYRIYAYTNSELQIALVALFSELLYRFPNVVVAQVTRE
SVQQAIANGITAQQIIHFLRTRAHPVLLKQTPILPPTITDQIRLWELERDRLQFTEGVLY
NQFLSQADFEVLRDRAQGLGCLVWQDVAHRVMVVTPQGHSEVKRFWKRQKSH
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgcgtgtccagctgcagtgcaagaatctgcacgaatacctgagagagctg
agtcccgagatactggacagactctacaaccatccagcaacatgtctggctgtctacagg
gaactcccctccctggcaaagaactatgtgatacgaatgctgttcctggatcagcctctg
ccccaggcagcagttgcgctgtgggtgaaaaaagacagccagaaggatcatgatgactgt
gtctcagtgttggcaggactccgcctttggcacagtcagcagctgcaggggggtctgcag
ggatacattttaaatccagtgttcaaagacaacctgaggatagctctgctcggcgggggc
aaagcatgggcagatgacggcagcactttgggtccagaccggcacgcgcgggacattgac
agtcttgaccgctatgctatggagcgctgggaggtcatcctgcatttcatggtgggttcc
ccctctgctgctgtcagtcaggacctggctcagctgctggttcaagcaggcctcatgaaa
agtgaggctggagaggcgccctacatcacctcagctggattccagttcctcttactggac
acagcctcccagctgtggtactttaccctgcagtacctcaaaacagctcagtccagaggg
atggacctggtggagatcttgtcattcctattccagctcagtttctctactcttggccga
gattactcggtggagggcatgagcgaatcattactcaccttcctgcagcacctgcgggag
tttggactggtctttcagaggaagaggaagtctaggcgctactaccccaccagactggcc
atcactctggctgcaggagtcaccaccagctcctcgtcctcttccaccccctcctcctcc
tcctcctcttgtaatttatcttccactcctggcgctggtgatgcagggtacattgtggta
gaaaccaattatcgaatctacgcctacacaaattcagaacttcagattgccctcgtggcc
ctcttcagtgagctgctgtatcgcttccccaatgtagttgtggctcaggtgacgagggag
tcagtgcaacaggccattgccaatggcatcactgcacaacagattatccactttctgagg
accagagctcaccctgtcttgctcaaacagacgccaatcctgcctccaactataactgat
cagatcagactgtgggagctggagcgtgatcgcctgcagttcacagagggagtgctctac
aaccagttcctctcccaggctgacttcgaggtgctgcgagacagagctcagggtctcggc
tgtctggtgtggcaagacgtggctcacagggtgatggtggtgacaccacagggacacagc
gaggtcaagaggttctggaaacgacagaagtctcactga
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