Acanthopagrus latus (yellowfin seabream): 119017518
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Entry
119017518 CDS
T08233
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119017518
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119017518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
zf-RING_6
Gp58
Prok-RING_4
PRP1_N
DUF445
Motif
Other DBs
NCBI-GeneID:
119017518
NCBI-ProteinID:
XP_036950118
EnsemblRapid:
ENSALTG00010003662
LinkDB
All DBs
Position
4:34363381..34365176
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AA seq
559 aa
AA seq
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MEQKAVQLDRETFSCSICLDLLKDPVTTPCGHSYCKNCINDHWDTEDEKRIYNCPQCRKS
FTPRPELLKNTMLAALVEQLKKTGLQAAAADLCYAGAEDVACDVCTGRKLRAVKSCLVCL
VSYCEKHLQPHFDVAQFKKHKLVEPSEKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRHNIQQRIQDREEDVKLLQQEVEAINGSADKAVEHSE
KIFTQLIRLMEERRSDVKQQVRSQQETEVSRVKELQEKLEQEITELKRKDAELKKLSHTE
DHNQFLHNYPSLSALSESTHSSSINIRPLNYFEDVTAAVSELRDKLQDVLSQKQTNVSLT
VTEVDVSLPEPEPKTRADFLRYSREITLDPNTAHRWLILSEGNRKVTNKNQTQSCSRHPD
RFTYWSQVLSRESLTGRCYWEVKRRGGGDGVVIEVAVAYKNISRAGKSDESAFGCNNKSW
RLDCETDGYEFHHSKVHTPVSGRLSSRVGVYLDHSAGILSFYSVSDTMTLLHRVQTTFTQ
PLYAGLYLDDGGSAEFCQL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaaagcagttcagctggaccgagagactttctcttgttcgatctgtttggat
ctactgaaggatccggtgacgactccctgtggacacagctactgcaagaactgtatcaac
gaccactgggacacagaggatgagaagaggatctacaactgccctcagtgcaggaagagc
ttcacaccgaggcctgagctgctgaaaaacaccatgttagcagctttagtggagcagctg
aagaagactggactccaagctgctgctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagctgtcaagtcctgtctggtctgtctg
gtctcttactgtgagaaacacctccagcctcactttgatgtggctcaattcaagaaacac
aagctggtggagccgtcagagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgtactgatcagcagtgtatctgttatctctgctctgtggacgaa
cataaaggccacgacacagtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgacacaacatccagcagagaatccaggacagagaggaagatgtgaagctg
cttcaacaggaggtggaggccatcaatggctctgctgataaagcagtggagcacagtgag
aagatcttcacccagctgatccgtctcatggaggaaagacgctctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcagcactcagtgagtctacacac
tcatccagcatcaacatccgtcctctcaactactttgaggatgtgacagcagctgtgtca
gagctcagagacaaactacaggacgtcctgagtcagaaacagaccaacgtctcactgaca
gtgactgaagtggatgtttcactgccagaaccagaaccgaagaccagagctgacttctta
agatattcacgtgaaatcacactggatccaaacacagcacatagatggctgatattatct
gaggggaacagaaaagtaacgaacaagaatcaaacacagtcttgttctcgtcatccagac
agattcacttactggtctcaggtcctgagtagagagagtctgactggacggtgttactgg
gaggtgaagcggagaggaggaggagatggtgtagtaatcgaagtagcagttgcatacaag
aacatcagcagagcagggaagtcagatgaaagtgcatttggatgcaataacaaatcttgg
aggttagattgtgaaacagacggttatgaatttcatcacagcaaagtccacactcccgtc
tcaggtcgtctgtcctccagagttggagtgtacctggatcacagtgcaggtattctgtcc
ttctacagcgtctctgacaccatgactctcctccacagagtccagaccacattcactcag
ccgctctatgctggactttatcttgatgatggaggctctgctgagttctgtcaactctga
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