Acanthopagrus latus (yellowfin seabream): 119017958
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Entry
119017958 CDS
T08233
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03320
PPAR signaling pathway
alat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119017958 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
119017958 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119017958 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
alat03310
]
119017958 (nr1h3)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119017958 (nr1h3)
Nuclear receptors [BR:
alat03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
119017958 (nr1h3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
119017958
NCBI-ProteinID:
XP_036951069
EnsemblRapid:
ENSALTG00010005156
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All DBs
Position
4:11906186..11918401
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AA seq
464 aa
AA seq
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MSTLSMTDIPDVGHDESKVFDGASELQLDCMVEGSSGSATMKHDGLLSLADLSHPDDFPV
PPHNGPSLTDMSSPLAIEPSDIKLDPAAGDTSASTDGQPVKRKKGPAPKMLGNEVCSVCG
DKASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAG
MLEQCVLSEEQIRLKKMKKQHEDETARSSTVVTPTPPLEAAALDPQQQEMIEKLVAMQKQ
CNKRSFLDRPKVTPWPQSQDLQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTR
EDQIALLKTSTIEIMLLETSRRYNPAIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEFS
KGMNDLHLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYIMIKRPNDHLM
FPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgctgtctatgactgatatcccagatgttggtcatgatgagagtaaggtgttt
gacggggcctctgagctgcagctggactgcatggttgagggaagcagtggaagcgccaca
atgaagcacgacggcctgctgtcgctggctgacctctcccacccagatgacttccctgtc
ccccctcacaacggcccttcactgaccgacatgagcagccctctggcgatagagccaagt
gacatcaagctggatccagctgcaggtgacacatctgccagcacagatggtcagccagtg
aaaagaaagaaggggcctgctccgaagatgcttggcaatgaggtgtgcagtgtatgcggt
gacaaggcctctggtttccattacaatgtgttgagctgtgagggctgcaagggcttcttt
cgacgcagcgtcattaaaagcgcccagtactcctgcaagaacaatggccgctgcgagatg
gacatgtacatgcgccgcaagtgccagcagtgccgcctgcgcaagtgtcgggaggcgggc
atgctggagcagtgtgtgctctcagaggaacaaatccgactgaagaagatgaagaagcag
cacgaggatgagacggcccgctcgtccacagtggtcacccccacccctccactggaagca
gccgcactggatccacagcagcaggagatgattgagaagctggtggccatgcagaagcaa
tgcaacaagaggtcgttccttgaccggccaaaagtcacaccgtggccacagagtcaggac
ttacagaatcgagaagtgcgtcagcagcgcttcgcccacttcactgagctcgcaatcatg
tcagtccaggagattgtggattttgctaagcagcttcctggtttcctagagctcacaagg
gaggaccagattgctctactgaagacatcaaccattgagatcatgctgcttgagacgtct
cggcggtacaaccctgctattgatagcatcacgtttctgaaggatttcagctataataag
gaggattttgccaaagcagggcttcagtttgagttcattaatcccatctttgagttctca
aaaggaatgaacgacctgcatctggacgaggctgaatacgccctgctcatcgccatcaac
atcttttctgcagatcggccgaacgtgcaggatcatgatctggtggagcgactgcagcag
ccctatgtggacgcactgcgctcttacatcatgataaagagaccaaatgatcacttgatg
tttccccgtatgctgatgaagctggtgagccttcgtacactaagtagcgtccactcggag
caggtttttgcacttcgcctccaggacaagaagcttcccccgctgctatctgaaatctgg
gacgtcaatgagtga
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