KEGG   Acanthopagrus latus (yellowfin seabream): 119018621
Entry
119018621         CDS       T08233                                 
Symbol
snrpa1
Name
(RefSeq) U2 small nuclear ribonucleoprotein A'
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:alat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119018621 (snrpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:alat03041]
    119018621 (snrpa1)
Spliceosome [BR:alat03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    119018621 (snrpa1)
 Complex B
    119018621 (snrpa1)
 Complex C
   U2 SnRNP specific factors
    119018621 (snrpa1)
SSDB
Motif
Pfam: LRR_9 DHU1_N LRR_4 LRR_8
Other DBs
NCBI-GeneID: 119018621
NCBI-ProteinID: XP_036952329
EnsemblRapid: ENSALTG00010004172
LinkDB
Position
4:11652275..11659105
AA seq 293 aa
MVKLSAELIEQAAQYTNPVRDRELDLRGYKIPVLENLGATLDQFDTIDFSDNEVRKLDGF
PLLKRLKTLLMNNNRICRIGENLEQSLPSLTELVLTSNNIQELGDLDPLATVKTLSLLSL
LRNPVTNKKHYRLYVINKIPQIRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRTKT
FTPGVAAQLEKKRTGPSQADVEAIKNAIANASSLAEVERLKGMLQAGQIPGRDLRQGPAG
IVEEEEEEEEEEEEEDGAQMDAHMDGGTEEETNEGDQEEEDADMDVESHVNGS
NT seq 882 nt   +upstreamnt  +downstreamnt
atggtgaaattatctgcagagctaattgagcaggctgctcagtataccaaccctgtgaga
gaccgagagttggatttacgaggttataaaatcccggtgcttgaaaatcttggagcaact
ctcgaccagtttgacactatagacttctctgataatgaagtcagaaaactggatggcttc
cctctgctcaaaagactgaagacattgctaatgaataacaacaggatttgtcgcataggt
gagaatctggagcagtctctgccaagtttgacagaactggttctgacaagcaacaacatt
caggagctgggtgacttggacccgctggccacagttaagacattgtcccttctcagctta
ttaaggaatccagtgacaaacaagaagcattacaggctctatgtcatcaacaaaatccca
cagatccgcgtgcttgacttccagaaggttaagctcaaggaacggcaggaggcggagaaa
atgttcaagggcaaacgaggtgctcaacttgcaaaggatattgccagacgaacaaaaaca
ttcactcccggcgttgcagcacagctggagaagaaaaggacggggccatctcaagctgac
gtggaagcaatcaagaatgccattgctaatgcttcatcgctggcagaggtggagagattg
aaagggatgctgcaggctggtcagatcccaggacgagatctcagacaaggtccagccggg
atcgtggaggaggaggaggaggaggaggaggaggaagaagaggaagatggtgcacagatg
gatgcacatatggatggaggtactgaagaagagacgaatgagggagatcaagaggaggag
gatgcagacatggatgttgagtcacatgttaatggatcctga

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