Acanthopagrus latus (yellowfin seabream): 119019418
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Entry
119019418 CDS
T08233
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03022
Basal transcription factors
alat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119019418 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
119019418 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119019418 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119019418 (gtf2h2)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119019418 (gtf2h2)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119019418 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
DZR
Motif
Other DBs
NCBI-GeneID:
119019418
NCBI-ProteinID:
XP_036953879
EnsemblRapid:
ENSALTG00010009093
LinkDB
All DBs
Position
5:complement(800830..828312)
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLRATVEEILFQSKRKRVIESHGQVRLGMMRH
LYVVIDCSRSMEDQDLKPNRLTSTLKLTEAFVDEYFDQNPISQVGIITTKNKRAEKLTDL
AGNPKKHIAALKKAVDTVCVGEPSLYNSLNLAIQTLKHMPGHTSREILIILSSLTTCDPA
NIYELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHTIASLTDQDAKPSFSMSHLDNSSGPSLSLEGYFCPQCHAKYTE
LPVECKVCGLTLVLAPHLARSFHHLFPLQAFTESPVEELQDDRFCQACQGELNDKIIFTC
PSCGSVFCVECDLFIHDSLHCCPCCIHSQSAS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagagccaagcggtgggaagggggctatgagaggacatgggag
gtgctgaaggaggatgaatctggctcactcagagccacagtggaggagatcctgttccag
tccaaaaggaaaagggtgatagagagccatggacaagtgaggcttggaatgatgcgtcac
ctctatgtggtgattgactgttcgaggagcatggaagaccaggacttgaaaccaaatcgc
ctcacctccacgctaaagctcaccgaagcttttgtggatgaatatttcgaccaaaacccc
atcagtcaggtgggtattatcaccacaaagaataaaagggctgagaagctgactgacctg
gcaggtaatccaaagaagcacattgctgctctgaagaaagcagtggacactgtgtgtgta
ggagagccatccctgtacaactctctcaacttggccatacagaccctcaagcacatgcct
ggacatacgagccgggagatcctgataatcctcagcagcctcaccacttgtgacccagcc
aatatctatgagctgatcaagaccctgaaatctctgaaggtgcgggtgtcagtgattggc
ttgtcagcagaggtccgggtatgtacggttttgaccagggagacaggcggatcataccac
gttatcctggatgagagccacttcaaagagctgctgatgctgcatgtcaaacctcctcca
gccagctcctcatctgaatgctctttaatacgcatgggtttcccacagcacaccatcgct
tcgcttactgatcaggatgccaagccttcattcagcatgtctcatctggacaacagcagt
ggcccgagtctttctctggaaggatacttttgtccacagtgccacgccaagtatacagag
cttcctgtcgagtgtaaagtgtgtggtttgactctggtgttggctccccatcttgccaga
tccttccaccacctcttccctctccaagcctttacagagagtcctgtggaggagctccaa
gatgacaggttctgtcaagcttgtcaaggagagctgaacgataaaattatattcacctgt
ccatcatgtgggagtgtgttctgtgtggagtgtgatctcttcatccatgactcgctgcac
tgctgcccatgctgtattcacagtcagagcgcctcctga
DBGET
integrated database retrieval system
