Acanthopagrus latus (yellowfin seabream): 119020314
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Entry
119020314 CDS
T08233
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119020314
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119020314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
zf-RING_6
Prok-RING_4
zf-C2H2
PRP1_N
Gp58
DUF445
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
119020314
NCBI-ProteinID:
XP_036955473
LinkDB
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Position
5:complement(30134661..30137108)
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AA seq
557 aa
AA seq
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MAQKAVQLDRETFSCSVCLDLLKDPVTTPCGHSYCKNCIKDHWDTEDEKRIYSCPQCRKS
FTPRPELLTHTMLAALVEQLKKTELQAAAADLCYAGAEDVACDVCTGRKLRAVKSCLFCM
ISFCEKHLQPHFEIPAYGKHKLVEPSEKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRHNIQQRIQDREEDVKLLQQEVEAINGSADKAVEHSE
KIFTQLIRLMEERRSDVKQQVRSQQETEVSRVKELQEKLEQEITELKRKDAELKKLSHTE
DHNQFLHNYPSLSALSESTHSSSINIRPLNYFEDVTAAVSELRDKLQDVLRDTWTNISLT
VMKVDVLLSNPQPKNKTRADFLRYSREITVDPNTANRCLLLSEGNRKATHTSQQQSYSDH
PDRFTEWRQVLSRETLTGRCYWEVEWRGEVGAAVAYKNISRAGRSYECGFGFNDKSWMLD
CSTYSYKFYHNKVQTPVSGPQSSRVGVYLDHSAGILSFYSVSDTMTLLHRVQTTFTQPLC
AGVWVYSESSAEFSKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaagcagttcagctggaccgagagactttctcttgttccgtctgtttggat
ctactgaaggatccggtgacgactccctgtggacacagctactgcaagaactgtattaaa
gaccactgggacacagaggatgagaagaggatctacagctgccctcagtgcaggaagagc
ttcacaccgaggcctgagctgctgacacacaccatgttagcagctttagtggagcagctg
aagaagactgaactccaagctgctgctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagctgtcaagtcctgtctgttctgtatg
atttccttctgtgagaaacacctccagcctcactttgaaatccctgcttatggaaaacac
aagctggtggagccgtcagagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgtactgatcagcagtgtatctgttatctctgctctgtggacgaa
cataaaggccacgacacagtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgacacaacatccagcagagaatccaggacagagaggaagatgtgaagctg
cttcaacaggaggtggaggccatcaatggctctgctgataaagcagtggagcacagtgag
aagatcttcacccagctgatccgtctcatggaggaaagacgctctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcagcactcagtgagtctacacac
tcatccagcatcaacatccgtcctctcaactactttgaggatgtgacagcagctgtgtca
gagctcagagacaaactacaggacgtcctgagagacacatggaccaacatctcactgaca
gtgatgaaagtggatgttttactgtcaaacccacaaccaaagaacaagaccagagctgac
ttcttaagatattcacgtgaaatcacagtggatccaaacacagcaaacagatgtctgtta
ttatctgaggggaacagaaaagcaacacacacgagtcaacaacagtcttattctgatcat
ccagacagattcaccgagtggcggcaggtcctgagtagagagactctgactggacgttgt
tactgggaggtggagtggagaggagaagttggtgcagcagtcgcatacaagaatatcagc
agagcagggaggtcatatgaatgtggatttggattcaatgacaaatcttggatgttagat
tgttccacatacagttataagttttatcacaacaaagtccaaactcccgtctcaggtcct
cagtcctccagagttggagtgtacctggatcacagtgcaggtattctgtccttctacagc
gtctctgacaccatgactctcctccacagagtccagaccacattcactcagccgctctgt
gctggagtttgggtttattctgaatcctctgctgagttcagtaaactcaaatag
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integrated database retrieval system
