Acanthopagrus latus (yellowfin seabream): 119025413
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Entry
119025413 CDS
T08233
Symbol
ranbp2
Name
(RefSeq) ranBP2-like and GRIP domain-containing protein 3 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03013
Nucleocytoplasmic transport
alat03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119025413 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119025413 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119025413 (ranbp2)
03110 Chaperones and folding catalysts [BR:
alat03110
]
119025413 (ranbp2)
04121 Ubiquitin system [BR:
alat04121
]
119025413 (ranbp2)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119025413 (ranbp2)
Chaperones and folding catalysts [BR:
alat03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
119025413 (ranbp2)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
119025413 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
zf-RanBP
WH1
TPR_16
TPR_14
TPR_1
TPR_2
TPR_7
TPR_8
PPR_1
Motif
Other DBs
NCBI-GeneID:
119025413
NCBI-ProteinID:
XP_036964850
EnsemblRapid:
ENSALTG00010028728
LinkDB
All DBs
Position
9:complement(19626047..19649134)
Genome browser
AA seq
3033 aa
AA seq
DB search
MRRSKAEVDRYVSSVQTSSPSLKEKPVKGFLFAKLYFEAKEYELAKRHVSEYLKVQERDP
KAHKFLGQLFEREGDINKAVGCYKRSVDLNPAQRDLVLKVAELLVSKEECDSRAEFWVDK
AAKLLPGNPAVFNLKECLLSRQGQQGWNRLFDLLQAELAARPADAHVNMKLVQLFCQDGR
LDEAVKHCLAVEKRGLLSRSLDWYKVVLRTLQEYLAQPSVSSNEKQCRLLQRELLLAHCS
LLRITLSDSSVQPSLDALRGFDEAMQLLSGVAGRHTDDLCEMFVEMRGHLYLHAATLLLK
LAQDRQQTWRAVIDLAALCYLLAYQVPRPKAKVTKRDQAAPQLLEQLANDRQSQAGHMLL
NLSTDSSTLIREVVEAFGNRSGQDSLFELLFGPQASTGSSFIANDDIHSINTSAPELSQL
AKWDAGSILLHGGDLQHLSWLGLQWTLRAQRAALRDWLQQLFPRLTLETSKLDTNAPESI
CLLDLEVFLQGVVFCSHCQLQETAKISSGVNQKQQQLYEPLCLPLPLLRLLTTVRQREWW
DAIYSLIHKQAAPGMSAKLRMIVQHGLNTLRAGEKNGLQPALAIHWAQCLSQTGDGVNSY
YDQKEYIGRSVHYWKVVLPLLERIKNRRSIPEPLDPLFIHFPSKDIQISSVRGYEEEAKI
AYAALLNIEGKTEEAIATLETINNMSSIWHLAKIYQRLSEEATNGVEETQDRCITFLRKF
RTYLSKIYSANADDIDKLPVSMEDIVDLLNDVNQQLGESGEAMDEEEKEEEVRLGPTHSS
PAHPTETSANISHIKFSTPSPNKSISPSKRHLMSSKTPPHWVEDQKSLLQMLCQQVEALK
NEVHDLRHNSSGNAGSPHHKMYGESYGAEGLQEPFTPVQSYHGAPLTVATTGPSVYYNQS
PAYNSQYLLRTAANVTPTKGPMYGMNRMPPQPHMYAYQPPTHTPPLQTAPPCIYPPQEPV
FGAPLRFESPATSLLSPYSEEYYGQGVTQQTTNPPLPEPGYFTKPSVVPVQPPKGIEGKP
MDFGKLSFSQQAPAEVPKVPSFGAPAVAQSTPSAAFKFNSNFKSNDGDFTFPASQAKHSE
SLLGLLTSDIPTKTDPVLEKSPAKEQLPNQAGIFTFGTKSATPFSFVDSTQSTGTGGLFG
KVEQPFKFGDVTKPVFGLGKTVAEEERAVESDNDSTHVEEDEDGPHFEPIVPLPDKVDVR
TGEEEEEEIFCNRAKLYRFDTETKEWKERGIGNVKILKHNTKGKVRLLMRREQVLKICAN
HYITADMLLKPNAGSDKSWVWNAIDYADEEPKPEQLAIRFKTVDEASLFKAKFEEAQKIV
LKSPERHDQPEEKEDSPNVSESLAAQFAPKEGEWDCAVCCVRNKPTDVRCAACQTANPNA
SSKPDIQPVVETKASPFTFKFGIDSSKPSSSGSPFTGFGAFGASIPSSFTFGTSKPADPV
TSAFGGGFGSQFGKKPGQWDCETCSTRNEASADSCVSCNALKASPKTTAVSPNVAVVQPS
ISAVGSGFGTQFMKQPGQWDCDVCEVRNEASSNRCVACQTPNPAAKSTEGAAVASNLPAV
SDFGADFVKKDGMWDCNNCLVRNDASAVECISCHTPHEPSSLEAMFGKKDGEWDCDACLV
RNNGSASKCVACMTPNPNAKSTASAAPSASTFSFTFGTKSSSSQPAATGFKMPFDTGKTF
QFGQSKDTSSASSFKFEAPPSGSSTTSSSAFSFSMPTQAGGFKFGFQEPAKETSSTDNEP
PSGSASSFLKSIADKHKESEIVSLPSVEQAQEDQNPLIAGKGSEFSFADLAKSTGGDFQF
GQKDPNFQGFSRAGEQLFTSLQATPTKTDASNEIEDDGMYKTEENDDIQFEPVVQMPDKV
DLVTGEEDEQVLYSQRVKLFRFDSCSSQWKERGVGVLKFLKNNCNGRLRVLMRREQVLKV
CANHWITTTMNLKPLAGSDKAWIWMANDFSDGDAKLEQLAAKFKTAELAEEFKEKFEECQ
RLLLDIPLQTPHKLVDTGRTAHLIQKAEEMKSGLKDLKFFLTDEKTKIKDDDNQGDITAS
SNVSGLAVKPLGETTGPTLEWDNYDLREEALDDTADSSVYASPIASSPLRKNLFRFGEST
GGFNFSFQPGISPSKSPAKLNQSRASVGTDDEQDVTQDEERDGQYFEPVVPLPDLVEIST
GEENEQVVFTHRAKLYRYDKELGQWKERGIGDLKLLQNYDTKRVRLIMRRDQVLKICANH
WISSAMKLEPMKGAEKAWVWSALDFAEEGEGNIEQLAVRFKLQDTANTFKQVFEEAKFAH
EKQELMNPVTSRVATPQDAGATGSAQTAPTVCGKAAIAVLEETTKERTELSPDTKPCAAG
SPGPVNPSKTVVSPPKFVFGSDSLQRFFGSPKFQSEESASSSKAKDSGLPAKASPAAPAF
KIPEKGPPQAGGGSAGSDEDSEVEVVYVREPTAEQAALARKLLLPLTFFCYQNEPGYTSD
DQTDDEDFESAVRALNGKLYADPPERKAAACGEEPDCQVVWEKKPTPEEEEKAKSLQLPP
TFFCGLSTTDSDTDHDKPEDFETEVRKAQRDLDAELNQAEEASSSHPVALEKPSSTPSSS
SVEAADVPPAAEEQTSDQPTETQTEAQSISSPIDLSTKKTPEPDSTTWTAAVAPTATTTG
QDSSGFGFNTLGGFSFADLAKNTDGFAFGTNDSNFSWANAGATVFGTPAPAPKNNGDEDG
IDEEDAANNVDIHFEPIVSLPEVETKSGEEDEEILFKERAKLYRWDRDLSQWKERGIGDI
KIMFHPTKHFYRILMRREQVLRVCANHTISQAMELKPMDVSPNALIWTATDYSDGEGVVE
QLAAKFKTAEITEAFKKTFCGCQSRMGKSDGDSSLASSPQMSRVQEHSRDTNPRVFLKVT
ADGETLGTITIELFSHIVPKTAENFRALCTGEKGFGLQNSIFHRVIPSFMCQGGDITNSD
GTGGKSIYGNKFEDENFDVRHTGPGILSMANRGRDTNNSQFFITLKKAEHLDFKHVAFGW
VQDGMDVVLRMGELGTKAGPPTKKLVITDCGQL
NT seq
9102 nt
NT seq
+upstream
nt +downstream
nt
atgcgacggagtaaggctgaagtggaccgttacgtttcctcagtacagacttcctctccc
tcactcaaagagaagccagtcaaagggtttttattcgctaaattgtactttgaagcgaaa
gaatatgaacttgcaaagagacatgtatcagagtatctcaaagtccaggagagggatccc
aaagcacacaaattccttggccagctctttgagagagagggagacatcaacaaggcagta
ggatgttacaagcggtcagtggacttgaacccagcccagagggacctggtgctgaaggtg
gctgagctgctggtcagtaaagaggaatgtgacagcagagccgagttttgggtggacaaa
gctgccaagctgctgccaggaaaccctgcagtcttcaatctgaaagaatgtttgttgagt
cgtcagggtcagcagggatggaaccggttgttcgacctcctccaggctgagctggcagcg
aggccagctgacgctcatgtgaacatgaagttggttcagctgttctgtcaggacggacgg
ctggatgaagccgttaagcactgcctggctgttgagaagagaggcctgctgagccgcagt
ctggactggtacaaagtggtgctgcgcacactgcaggagtatctagctcagcccagcgtc
tccagtaatgagaagcagtgtcgacttctgcagagggagctgctattggcccactgcagc
ctgctgagaatcacactgtctgacagcagcgtgcagcccagcctggatgcccttaggggt
tttgatgaagctatgcagttgctgagcggcgttgctggccgccacacagatgatctttgt
gagatgtttgtagagatgagaggtcatctttatctacatgctgccacactgctgttgaag
ctggctcaggatcgccaacagacgtggagggccgtcattgacctggctgcactgtgctac
ctgctggcataccaggtccccagaccaaaggctaaagtgaccaaaagagaccaggcagcc
ccacagcttctggagcaactggccaacgacagacagagtcaggccggccacatgttgctg
aacctgagcactgattcatccaccttgatcagagaggtggtggaggcgtttgggaaccgt
agcggtcaagactctctgtttgagctcctgtttggaccacaggcctccactggatcgtcc
tttattgccaatgatgacatccattccattaacacctcagctccagaactctctcaactg
gccaaatgggacgcaggctccatcctgctgcacggtggtgacctgcaacatctgagctgg
ctgggcctacagtggaccctccgggctcagcgagcggccctgcgggactggctgcagcag
cttttccctaggcttactctggaaacttccaaactggacacaaatgcaccagagtccatc
tgcctgctggacctggaggtgtttttacaaggtgtggtattctgtagccactgccaactc
caggagacggcgaagattagcagtggagtgaaccagaagcaacagcagctctatgagcct
ctctgcctcccgcttcctctccttcgcctcttgacaaccgtcagacagagggagtggtgg
gatgccatctacagcctcattcacaaacaggcagcacctggtatgtcagccaagctacgg
atgattgtgcagcatggactcaacactctgagggctggagagaaaaatgggctccaacca
gctttggccatccactgggctcagtgtctcagccagacgggagatggagtgaactcttac
tacgaccagaaggagtacatcggccgcagtgtccactactggaaagttgtacttccacta
ttggaaaggatcaaaaacagacgcagtataccagaaccgcttgaccccctcttcatacac
ttcccctccaaagacattcagatttcttctgttaggggctatgaagaagaagctaagata
gcatatgcagctctcctcaacatagaaggcaagacggaggaggccatcgctaccttggaa
actatcaacaacatgtcatccatttggcatttggcaaagatctaccagcggttatctgag
gaggcgaccaacggggttgaggagacccaagacagatgcatcacttttctcagaaagttc
aggacatatttgtcaaagatctatagcgctaacgccgatgacattgacaaactgcctgtt
tccatggaggatattgtggatctcttgaacgatgtgaaccagcagctgggagagagtggg
gaggccatggatgaagaagagaaggaggaggaagttcggctaggacccactcactccagc
cctgctcatcccacagaaacatctgccaacatatcccacattaagttctccactccatct
ccaaacaaaagcatctctccttcaaaaagacacttgatgtcttccaagacgccacctcat
tgggtggaggaccagaaaagtctcctacagatgttgtgtcagcaagttgaagctctcaag
aatgaggtccatgatctgagacacaactcttcaggaaacgcaggctcacctcatcacaag
atgtatggggagagctatggggccgagggcctgcaggagccttttacgccggtccagtcc
taccatggggccccgctaacagttgccaccacaggcccgtctgtgtactataaccagtct
ccagcttataactctcagtatctcctgcgcacggcagcaaatgtaacccccaccaagggc
ccaatgtatggtatgaaccgtatgccacctcagccacatatgtacgcctaccagccgccc
actcatactcctccattgcagacagccccgccctgcatttacccaccccaagaaccagtc
ttcggtgcccctcttcgatttgagtcaccagccacgagccttctttccccatatagtgag
gaatattatggccagggtgtaacccaacaaacaacaaaccctcccctgcctgaacctggc
tacttcaccaagccgtctgtagtccctgttcagcctccaaagggcattgaggggaagcct
atggactttgggaagctctctttcagccagcaggcccctgctgaagtcccaaaagtgcct
agttttggagcgccagcagtcgcccagtcaacaccctcagctgcttttaaattcaactca
aactttaaatccaacgatggagattttactttcccagcgtcacaggccaagcacagtgaa
agtctgcttggtcttcttacatcagacattcccactaaaacagaccctgttctagagaag
tctccagccaaggagcaacttcccaaccaagcaggaatcttcacctttggcactaaaagt
gccactcccttctcttttgttgattccacacagagcaccggcactggaggtctgtttgga
aaggtggagcagccatttaaatttggtgatgttacaaagccagtgtttgggcttggcaag
actgtagcagaagaggaaagggcagtggagagcgataatgacagcactcatgttgaggaa
gatgaggatggtccacactttgaacccattgtacctctacctgataaagtagatgtgaga
acaggtgaggaggaggaagaggaaatcttttgcaacagggcaaagctgtatagattcgac
acagagacaaaagaatggaaggagcggggaattggaaatgttaaaatcctaaaacacaac
actaaagggaaggtccgcctcctaatgagaagggaacaggtccttaagatctgtgcaaac
cactacatcactgctgacatgctactgaaaccgaatgctggctctgacaaatcctgggtc
tggaatgccattgattatgcggatgaagagcctaagcctgaacagctggccatccgcttc
aaaacagttgatgaggcatcacttttcaaagccaagtttgaggaagcccagaaaattgtg
ctcaaatcaccagaaaggcatgatcaaccagaggagaaagaggattccccaaatgtttct
gaatcactcgcagcccagttcgctcccaaagaaggagaatgggactgtgctgtttgctgt
gtaagaaataaacccacagatgtgcgatgtgctgcttgtcaaactgcaaatcccaatgcc
tcatccaagcctgacattcagcctgttgttgaaaccaaagcaagtccctttactttcaaa
tttggcattgattcatccaaaccaagtagctctggttctccatttactggatttggtgct
tttggagcttcaataccctcctcattcacatttggcacctcaaaaccagctgaccctgta
accagtgcgtttggtggtggctttgggtctcagtttggcaagaagccagggcagtgggac
tgtgagacatgttctacaagaaatgaggccagtgctgacagttgtgtttcttgtaatgct
ctcaaagcctctcctaaaacgactgcagtgtcaccaaatgtcgctgtagtgcagccctca
atatctgctgttggctcagggtttggcacccagtttatgaagcagcccgggcagtgggac
tgtgatgtatgtgaagtaagaaatgaggcctcttccaacagatgtgtcgcctgtcaaacc
cccaaccctgctgctaaatcaacagagggggctgcagtagcatcaaatctgccagcagtg
tcagattttggggctgattttgtaaaaaaggacgggatgtgggactgcaacaactgcctg
gtcagaaatgatgcatcagctgttgaatgcatttcctgccataccccacatgaaccttcc
tctttagaagccatgtttggcaagaaggatggagaatgggattgtgacgcttgtctggtg
agaaataatggctctgccagtaagtgtgtggcctgtatgacaccaaatccgaatgctaaa
agcactgccagtgctgctccttcagcctccaccttcagttttacctttggcaccaagagt
tcatcaagccagcctgctgcaactggatttaaaatgccttttgacactgggaaaaccttt
cagtttggtcaaagcaaagatacaagctctgcttcttcttttaagtttgaagcacctcca
tctggatcaagtaccacaagttcttctgccttctctttctcaatgcccactcaagctggt
ggcttcaagtttggctttcaggaacccgcaaaagagacttcctcaactgataatgaacct
ccatcagggtcagcctccagttttctgaaaagtatagctgacaaacacaaggagagtgaa
attgtctctctaccctcagttgaacaagcccaggaagatcaaaatccattaattgctggt
aaaggcagtgaattcagctttgcagacttggcaaaatccactgggggagatttccagttt
ggccagaaagatcccaatttccaaggtttctctagggctggtgaacagctgttcacatca
ttacaggcaacccccacaaagaccgatgcctcaaatgagatagaggacgatggcatgtat
aaaacggaagaaaatgatgacatccagtttgaaccagtggtccagatgcctgataaggtg
gacctggtgacgggggaggaggatgaacaagttctttattctcagcgtgtgaaactgttc
agattcgactcctgcagcagtcagtggaaagagcgtggcgtaggagtccttaaatttctg
aagaataactgtaatggcaggctgagggtgctgatgagacgagagcaagttctaaaggtg
tgtgccaaccactggatcaccaccaccatgaatctgaagcccctggcaggctcggacaaa
gcatggatttggatggccaatgacttttccgatggagatgctaaacttgaacagctggct
gcaaagttcaaaactgcagagctcgctgaggagtttaaggagaagtttgaagagtgtcaa
agacttctcctggacatccccctacaaaccccccacaagcttgttgacacaggaagaaca
gcacacctcattcagaaagcagaggaaatgaagtctggtttgaaagaccttaaattcttt
ttaacagatgagaaaacaaagatcaaagatgacgacaaccagggagacatcacggcatcc
agcaatgtttcaggccttgcagtcaagcctcttggtgaaacaactggccccaccttggag
tgggataactacgacctcagagaagaggctttagatgataccgctgactcctcagtctat
gcctctcccattgccagcagccccctgcgaaagaaccttttccgttttggagagtccact
ggtgggttcaacttcagcttccaacctggcatcagtccctccaagtctcctgctaagctg
aaccagagcagagcctcagtgggcactgatgacgagcaggatgtaacccaggatgaggag
agggatggccagtactttgaacctgtcgtgccattgcctgacctggttgagatttctacc
ggagaggagaatgaacaggtggtcttcactcacagggccaagctgtaccgctatgataag
gaactgggccagtggaaggaaaggggtattggagacctcaagcttttgcagaattacgac
accaaacgagtgaggttgataatgaggagagaccaggtgcttaagatctgtgccaaccac
tggatctcatcagccatgaagctggagcctatgaagggtgcagagaaggcctgggtctgg
agcgccttggactttgctgaagaaggagagggtaatatagagcagctggctgtgagattc
aagctgcaggacactgcaaacacattcaaacaggtctttgaggaggccaagtttgcacat
gaaaaacaggagctcatgaatccagtgacatccagggtcgctacacctcaagacgccgga
gcaacagggtctgcacagacagctccaactgtatgtgggaaggcagccatcgctgtcctg
gaagagaccacaaaggaacgtacagagctttcccccgatactaaaccatgtgcagctggt
tctccaggtccagtcaacccctcaaagacggtggtgtctccccctaagtttgtctttggc
tctgatagcctccagaggttttttggctctcctaaatttcaatctgaagagtctgcatcc
agttcaaaagccaaagattctggacttcctgccaaggcttcacctgcagcaccagccttc
aaaattccagagaaagggccccctcaggcaggaggaggcagtgcagggtcagacgaggac
tctgaggtggaggttgtgtatgtcagggaacccactgcagaacaggcagctttagccagg
aaactcctgctgcctctcaccttcttctgctaccagaatgaaccaggctacaccagcgat
gaccaaactgacgacgaggactttgagtcggcagtaagagccttgaatggaaagctctac
gcggatcctcctgagagaaaagctgcagcctgtggtgaagagccagactgccaggtggtg
tgggaaaagaagccgacaccagaggaggaggagaaggctaaaagcctccagcttccaccc
accttcttctgcggcctgagcaccacagacagcgacacagaccacgacaaacccgaagac
tttgagacggaagtccgcaaggcacagcgagacctggatgctgagttaaaccaagctgaa
gaggcctctagcagccatcctgtagcccttgagaagccatcgtcgactccatcatccagc
agcgtagaagctgcagacgtaccacctgcagccgaggagcagacctcagaccagccaaca
gagactcagactgaggctcagagcatcagctctcccattgacctgtccactaagaagacc
ccagagccagactccaccacttggactgcagctgtagctcctacagctacaaccactggt
caagactcctccggctttggcttcaacacattgggaggcttctcttttgctgacttggcc
aaaaacacagatggatttgcatttggaacaaatgactctaacttctcgtgggccaatgct
ggagcgacagtattcgggacgccggcgccagctccaaaaaacaatggcgatgaggacggc
attgatgaagaggacgccgcaaacaatgtggacattcactttgagccaatagtgtcacta
ccagaggtggaaacaaagtccggagaggaggatgaagaaatcctgttcaaggagcgtgcc
aagctgtaccgatgggaccgtgacctgagccagtggaaggagcgaggcatcggcgacatc
aagatcatgttccacccaaccaaacatttctaccgaatcctgatgagaagagagcaggtg
ctgagagtctgtgccaatcacacgatctcacaggcgatggaactcaaacccatggatgtg
tcgcctaatgcgctgatctggacggccaccgactactcagatggcgaaggtgtagtggag
caactggcggccaaattcaaaacggctgagatcactgaagccttcaagaagacgttctgt
gggtgtcagagtcgcatgggcaaaagtgatggcgattcatcgcttgcatcctcgccacaa
atgtcaagagttcaagagcactccagagacactaacccccgggtgttcctaaaagtgaca
gccgacggggaaacgctgggcaccatcaccatcgagcttttctcccatatcgtccccaag
accgcggaaaacttcagggctctctgtaccggcgagaaaggcttcggactgcagaactcc
atcttccacagggtcataccatcattcatgtgccagggcggtgacatcaccaacagtgac
ggcacaggaggcaagtcgatctacggcaacaagtttgaggatgagaactttgatgttcgg
cacacgggaccgggcatcctgtcaatggccaaccgcgggcgcgacaccaacaactcgcag
ttctttatcaccctgaagaaagccgaacacctggacttcaaacacgtggctttcggctgg
gttcaggatggcatggatgtggttttacggatgggagagctgggcacaaaggcaggcccg
cctacgaagaagctcgtcatcacagactgtggacagctctag
DBGET
integrated database retrieval system
