Acanthopagrus latus (yellowfin seabream): 119027842
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Entry
119027842 CDS
T08233
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119027842 (frem1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
119027842
NCBI-ProteinID:
XP_036969221
EnsemblRapid:
ENSALTG00010012041
LinkDB
All DBs
Position
10:complement(12016331..12047980)
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AA seq
2184 aa
AA seq
DB search
MGSRGQTLPWTLFPVLLLAMTYSSHCSLVKVNKGLKVKRGQSTYLQEGDLQFHIPRQKDA
CKVEVVLNEPITQRVGKLLPQVFDCHYLADEVKYVHNGCPLLKEDAVKLRLYRFTETETH
MEVFSLHVDIMEPECSIIKLGPKFLEVPEFYSLSDVVDGNVVSFHYERRSSLECSIHLSG
HDTHLPAHGQLVTGEPERAMKRGDEPESFIHLRQQLDNKARAMCKSEDCLKGLKLPKFTK
IPCDDFLMMGLRYQHIDPPSPDVDYIAIRLDLKDTRSGSIYQSEQAWIPVRIAGAMPNQP
PKPSFMSMFILEVDQFILTPLSTATLDAEDEETLKQLLVFNITKPPADGFITHLSDHTRP
VFSFTWLDLNDMLIGYQPPNSSHSQRRTYQVEFEVHDFFFEKSQSMTVHVSVRNADTNAP
RVSWNMGLSLLEGQSRPIMWEQLQLVDNDNLNAVRIITVDGLQHGRLTVRGGKGFMFTVN
DIKAGVVRYHHDDSDSTKDFIIFRITDGHHQTRHKFPIKILPKDDSPPFLITNMLLEVSE
GQMALLRGSILQASDMDSSDDYILFNITRPPQAGEVMKIPGPGLTGYPVRHFLQKDLSQS
MIYYRHLGNEVFDDSFEVVLSDFHDPPNLSETQVLMVHIEPVPDQPPKEVPGSTRCLVIK
ETEVLHITRQHLHFVDQESPDSELTYTVTTPPFYNGPHSSPDAGRLFLVDSIPKFTKDSN
APVLRLFTQHAVNFMKVAFMPPIMDIGPYPQYIQMILSVTNHLGKTVPGICFNITVVPVD
NQPPQVITNPLAVDEGGECWLGPEHLLLSDVDSMEQVIQVELQRDPRHGALQLGGLPLKP
GQVFTMQDLKSLKVRYSHDGSETVEDNIEFTATDGTNSVSFVLQVKVKPVNDEVPVLAPG
LKPVLSCEEGQEIVITAEFIYATDADSDNSTLTFLIARQPYHGVVLRSGVIVDRFIQADI
TAGIIAYKHTGLEIGLTPRRDTITFVISDGDTEKSAACCDGGNPGRTRGTAQHSLPVYDL
RITVFPVDSQPPSLITGDIFTVDEGGTAPITASHLKASDVDTVLDELVISLISPPQFGYI
ENVLPSPGFEKSNTGISIASFSYRDIIDGHVNYVQSRHQRMEPTADQFMLCVSDGKHSSA
HVPFYIIINPTNDEIPEFVARNITVREGETKQLDSSVLHAMDLDVPKNILRFSVVKAPQH
GSIVNRGSEKPPGRRREAGARSPVVDFTMADLTNGMDLMYMHDDSENTEDSFTIQLTDGR
HRLHRQVAVEVVPVNDEEPRVIRNNGLEVEPGEARLISSVALFAQDSDTPSSEVMYILES
VPTQGILQLKEGQDWVTLTAGRNCTQERVDMNLLRYVHTGVHGAKTQDFFVFHLLDGENR
SPPQHFHISVKDLEKGNIAIFVRPVNVSRGDRVVLTTDVLLATDHTDKPEELLYVVTNPP
PHGHIEYIKHPGLAISTFSQMDIAANLVAYVHDNSASTPTETFQFVVSNGKTSRNGSFVI
TVEMVDRVLPSLSSNKGLSVPQGSSMILGPDCLAMSDPDTPPSALTFVLLQPPQYGRLLL
GGATLTAGSNFTQRNIQELEVTYKHDAGPSQIDRFAFTGSDSTGQGFLVDGRLHTAPVFF
TIQIKPLDKSSPEVVKLVPLWKAELLGDGRYGIFLSSRELKAQDSDSRDDELMFCIVRQP
YFGYLENMTTGAFVPQRFFQTELNKRTVVYVINPDRESLSDSLEFTVSDPLGNTGPSHIL
EFSWSSVELSQPEYSVCEEQGTVSLDVIRRGNLAESSYITVKVKEVTATIGKDFLISPSS
LIQFDPGVSKRSWHAEIIQDHLEEAEETFEVLLVSPEGTVISSIHTAQVIIRESAGQAGG
RGACQLNHDREPPLLGGKEIRSDGYPQHGSIQLEKLPLGTDSVIWSRGDSVSRPAPKKKL
RVRGNPKSIAPSSVFHNGTDIVYTYHGIMQMQVEDDTSPSRKGRKANIRVVSRGAQQQAS
GVLTGSKSDHRRKNLKPPKGSQAKGHATADNTMPKPCVPELIGLLHFNQTTNQLFHCNGV
SWKPWAPTDQMVGAQMCPQGWTFHNGRCYTLSTEHKVTWSTANRACRERYKGTLVSVLSQ
VDMDWLWDFSGRKPFWIGLNDREGQGRWEWAGGEPVSYTNWRKTPPRSKMKGNKKCVLVW
RRAKWQIRDCKTSRGHRFVCSVKT
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
atgggttcacggggtcaaacactaccctggaccttgtttccagtgcttctgctggcaatg
acctattcatcacactgttcccttgtgaaagtcaataagggtttaaaggtgaaacgaggt
cagtcgacctacctccaggagggtgacctgcagttccatattccccgtcagaaggatgca
tgcaaggtggaggtggtgttaaatgagcccatcactcagcgagtgggaaaactcctgcct
caggtatttgactgccactatctggctgatgaggtgaagtacgtccacaacggctgtccg
ttgttaaaggaggacgctgtcaagctccgactgtacaggttcacagagacagagacacac
atggaggtgttttctctccacgtggacattatggaacctgaatgcagcatcataaagctg
gggcccaaattcctggaggtccctgagttctacagcctctctgatgtcgtggatggtaat
gtggtgtccttccactatgagaggaggtctagcctggagtgtagcatccatctgagcggc
catgacacccacctgccagcccacggccagctggtcaccggagagccagagagagccatg
aagagaggggatgagccagagagcttcatccacttacgtcagcagctagataataaagcc
agagcgatgtgtaaatccgaggactgcctgaagggtctgaaactgcctaagtttaccaaa
attccctgtgacgacttcctaatgatggggctgagataccagcacatagaccctccatcg
ccagacgtggactacatcgcaatcagactggaccttaaggacaccaggagtggcagcata
tatcagtccgagcaggcctggattccagtgcggatcgccggtgcaatgcccaaccagcct
cccaaaccgtccttcatgtccatgttcatcctggaggtggaccagttcatcctaacgccg
ctgtccactgctacactagacgccgaggacgaggaaactctcaaacagcttttggttttc
aacatcaccaaaccccctgcagacggcttcatcacccatctgtccgaccacactcgcccg
gtcttctcctttacctggctcgatctcaatgacatgctcattgggtatcaacctccgaac
tcctcacatagccagcgccgaacttaccaggtggaatttgaggttcatgattttttcttc
gagaagagccaatcaatgactgttcatgtgtctgtaaggaatgcagatacaaatgcacct
agagtgtcttggaacatgggtctcagtctgttagagggtcagtctcggccgatcatgtgg
gagcagctccagcttgtggacaacgacaacctgaatgccgttcgtatcatcactgtggac
ggcctgcagcacggacggctcactgtcagaggtggaaagggcttcatgttcactgtcaat
gacatcaaggcaggcgtggtccgctatcaccacgacgacagcgactccaccaaagacttc
atcatcttccggatcaccgacggccaccatcagacccgacacaagttccccatcaagatc
ctgccgaaggacgacagccctccgttcctcatcaccaacatgctgctggaagtgtcagag
ggacagatggctctactgagaggctcgatcctccaggcctcggacatggactccagcgac
gactacatcctctttaacatcacccgccccccacaggcaggagaggtcatgaaaatccca
ggaccggggctcacaggttatcctgtcagacactttctgcagaaagacctgtcccagtcc
atgatttactatcgacacctcgggaatgaggtgtttgatgactcctttgaggtggtgctg
tcggatttccacgacccgcccaacctgtccgagactcaagtgttgatggttcacatagag
cctgttccagaccaaccgcctaaagaggtccctgggtccacccgatgtcttgtgatcaaa
gaaaccgaagtgctccatataacacgacaacatcttcactttgtagaccaggagtctcca
gacagtgagctcacatacacagtcaccactccacctttctacaatggtcctcatagcagt
cctgatgctgggaggttgttcttggtagacagcatacccaaattcaccaaagactccaat
gcgccagttctgaggctcttcacgcagcatgcagtgaacttcatgaaagttgccttcatg
cctcccatcatggacatcggcccttacccccagtacatccaaatgattctctctgtaacc
aaccacctgggcaaaacagtccctggcatctgctttaacatcaccgtggtgccagtagac
aaccagccaccacaggtcattaccaaccctctggctgtagatgagggaggggaatgctgg
ctcggcccggagcacctgctgctgtcggacgtggactccatggaacaagtcatccaggtg
gagcttcagagggacccgcgacacggagctctgcagcttggcggcctcccgctaaaacca
ggacaagttttcaccatgcaagacctgaaaagccttaaagttaggtacagtcacgacggc
tcagaaactgtagaggacaatattgaattcaccgcaacagatggcaccaattcggtcagt
tttgtcctgcaagtgaaggtgaaacccgtcaatgacgaggtcccggtgttggctcctggc
ttgaagccggtcctcagctgtgaggagggacaggaaatagtcatcacagcagagtttatc
tacgccacagacgcggacagtgacaacagcaccctcaccttcctgatcgcccggcagccg
tatcatggtgtggttctccggagcggtgtcatcgtcgatcgcttcatccaggccgacatc
actgcagggatcattgcctacaaacacacagggctggagatcggactcactcctcgccgt
gacaccatcacctttgttatttctgacggagacacagaaaagtctgctgcatgctgcgat
ggaggaaaccccggcaggaccagaggcactgctcagcacagcctgcccgtgtatgacctc
cgcatcacggtgttcccagtcgacagccagccaccctcactcataacaggagacatcttc
acggtggatgagggtgggaccgccccgattactgcgtctcacctgaaggcctctgatgtg
gacacggtcctggacgagctggtgatcagtctgatttctccgccacagtttggctacatt
gaaaatgtcctgcccagtcccggctttgagaaaagcaacacgggcataagcatagcctcc
ttttcatacagagacatcatcgatggccacgtgaactacgtccagtccagacaccagagg
atggagcccaccgccgatcagttcatgctctgcgtatcagacggcaaacacagctctgcc
catgtccccttctacattatcattaacccgactaacgatgagatcccagagtttgtggct
cgcaacatcacagtccgagagggagaaacgaagcagctggactcgtccgtgttacacgcc
atggatctggatgtgcccaagaacatcctgcgcttcagcgtggtcaaagccccgcagcac
ggcagcatcgtcaaccgcggcagcgagaagccgcccggcaggagacgggaggccggtgct
cggtccccagtggtcgacttcacaatggctgatcttacaaacggtatggatctgatgtac
atgcacgatgactcggagaacacggaggacagtttcaccatccagctgacggacggcagg
caccgcctccacagacaagtggcggtcgaagtggtgccggtgaacgacgaggagcctcgt
gtcatcaggaacaatgggctggaggtggagccaggagaggccaggcttatatcaagtgtc
gcactgtttgcacaggacagtgacactccttcttccgaggtcatgtacatattggagagc
gttcctacacaggggatacttcagctgaaggagggtcaggactgggtgacactgacagcg
gggagaaactgcacgcaggagagggtggacatgaaccttctgcgctacgtgcacacaggc
gtgcacggtgccaaaacgcaggacttctttgtgttccacttgttggacggagagaatcga
tccccgccgcagcacttccacatctcggtcaaagacctagagaaaggaaatatcgccatc
tttgtgaggccggtgaacgtcagccgaggggaccgcgtggttctcaccacagacgtgctg
ttagccacggaccatacggacaagcccgaggagctgctgtatgtcgtcaccaaccctcct
cctcatgggcacatagagtacatcaaacaccctggactggccatctccaccttcagccag
atggacattgccgccaaccttgtggcttacgtgcacgacaacagtgccagcacacccacg
gaaacctttcagtttgttgtcagtaatggtaagaccagccgaaatggcagctttgtgatc
acggtggagatggtggatcgcgtcctgccatccctgtcctccaacaagggcctctcagtg
ccacagggctcttccatgatcctgggtccagactgcctggccatgtctgaccctgacact
ccacccagtgccctcaccttcgtcctcctgcagcccccacagtatggcaggctgctttta
ggtggggccacgctaactgctggctcaaacttcacccagaggaacatccaggagctggag
gtgacgtataaacacgatgcagggccatcacagatcgaccggttcgccttcactggctct
gacagcaccggtcagggtttcctggtggacgggcgcttgcatacggcacctgtgttcttc
acaatccagatcaagcctttggataaatcctctcctgaggttgtgaagctggttcctctc
tggaaagctgagcttttaggcgacggacggtatggaatcttcctgtcgtctcgggagctc
aaggcccaggacagcgacagcagagatgatgagctgatgttctgcatcgttcgccagcct
tacttcggctacctggagaacatgacaacaggtgcttttgtaccgcagcgcttctttcag
acggagctgaacaagagaactgttgtctacgtcatcaacccggacagggagtctctgtca
gacagcctggagttcacagtgtctgatcctttagggaacaccgggccctcccacatactt
gagttcagctggtccagcgtggagctgtctcagcctgagtactctgtgtgtgaggagcag
gggactgtctcgctggacgtcatcaggagaggaaacctggcagagtcatcgtacatcact
gtaaaggtgaaggaggtgactgcgacgattggaaaagatttcctcataagcccgtcttcc
ctcattcagtttgatccaggagtgtcaaagaggagctggcacgctgagatcattcaggat
caccttgaggaggccgaggagacgttcgaagtgctgctggtgtcccccgagggcacggtg
atcagcagcatccacacggctcaggtcatcatcagagagtccgcgggtcaagcgggaggg
agaggagcgtgccagctgaaccacgatcgagagcctcctcttcttggaggaaaagagatc
cgctcagacgggtacccccagcacggatccatccagcttgagaaactgcccctcggcact
gattcagtcatctggtcccgcggagacagcgtctccagacctgccccgaagaagaaactc
agagtgaggggcaatccaaagtcgattgcaccttcatcagtttttcacaatgggacagac
atcgtttacacgtaccacgggatcatgcagatgcaagtagaggacgacacctccccatcg
aggaagggcagaaaggcaaacatccgtgtggtgagcaggggagcacagcagcaggcgtca
ggagtgctcactgggtccaagtcagatcatcgaaggaagaacttgaaacctccaaaagga
tcacaagctaaaggacatgccacagctgataacaccatgccaaagccctgtgtgccagaa
ctgattggcctcctgcatttcaaccagaccaccaatcagctctttcactgcaacggcgtg
tcctggaaaccctgggcaccaactgatcagatggtgggtgcgcagatgtgtccccagggc
tggacctttcacaatggccgctgttacaccctcagcaccgagcacaaagtgacatggagc
acagctaacagggcctgcagggagagatataaaggcacgcttgtgagtgttctgtctcaa
gtcgacatggactggctgtgggactttagtggaagaaaaccattttggataggcctaaac
gacagagagggccaaggccgttgggagtgggcaggtggagagcccgtcagctacactaac
tggagaaagacgccccctcgctccaaaatgaaggggaacaaaaagtgtgttctggtgtgg
aggagggcaaagtggcaaatcagagactgcaagacgagcagaggtcatcgctttgtgtgt
tcagttaagacttga
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integrated database retrieval system
