Acanthopagrus latus (yellowfin seabream): 119029389
Help
Entry
119029389 CDS
T08233
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119029389
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119029389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
PRY
zf-C3HC4_3
zf-RING_2
CC149
zf-RING_6
zf-RING_5
UPF0242
zf-RING_10
U-box
CCDC47
zf-RING_11
Golgin_A5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
119029389
NCBI-ProteinID:
XP_036972057
EnsemblRapid:
ENSALTG00010017811
LinkDB
All DBs
Position
12:complement(4094451..4097455)
Genome browser
AA seq
546 aa
AA seq
DB search
MAQRGTEQEKLHCSICLDLLKDPVTIPCGHSFCMNCVRSYWEEQDQKKICSCPQCRQTFQ
PSPALMKNTMLADLVEELKKTGLQAAPADHCYAGPEDVACDFCTGRKLKAVKSCLQCLVS
YCEQHLRPHYDSPAFEKHKLVDPSKKLQENICTRHSEVMKIFCRTDQQCICYLCSMDEHK
GHDTVSVASEMTEKKKELEVSRQKIQQRIQDREKDMKLLQQEVEAVNGSADKAVRDSEKI
LTDMKQQIRSRQKTEVTHISKLQEKVEQEIADLKRKDADLEQLLHLGDQTQFLNNYTLLP
RLSEASDSLSINTRSQSHTEGATAAVSEVRDKLQAILSDVWSKTSLTEAGVDILLPQSEP
KTRSEFLQYSRQLTLDPNTAHDCLSCKSSRAHHNHYGVCHRPGFPQHPDRFISWSQVLCR
EHLSGRCYWEVEWSGCEVFVAVAYKDISREGRESVFGNNVKSWALQCFSDSFEFRHNNIR
TSISGPPSSTIGVYLDHHAGILSFYSISDTMTLLHRVQTTFTQPLCPGLGLFYNRAYAGM
WGDMED
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaacgagggactgagcaggaaaaactccactgttcgatctgtctggatctactg
aaggatccagtgactattccctgtggacacagcttctgtatgaactgtgttagaagctac
tgggaagaacaggatcagaagaaaatctgcagctgtcctcagtgcagacagaccttccaa
ccgagccctgccctgatgaaaaacaccatgttagcagatttagtggaggagctgaagaag
actggactccaagctgctccagctgatcactgctacgccggacctgaagatgtggcctgt
gatttctgcactgggaggaagcttaaagctgtcaagtcgtgtctgcagtgtctggtctct
tactgtgagcagcacctccggcctcactatgactctcctgcctttgagaaacacaagctg
gtcgacccctccaagaagcttcaggagaacatctgtactcgtcacagcgaggtgatgaag
attttctgccgcactgatcagcagtgtatctgttatctctgctccatggatgaacataaa
ggccatgacacagtctcagttgcatcagaaatgactgagaaaaagaaggagctcgaggtg
agtcggcaaaagatccagcagagaatccaggacagagagaaagacatgaagctgctccag
caggaggtggaggctgttaatggctctgctgataaagcagtgagagacagtgagaaaatc
ctcacagacatgaagcagcagatcagatctcgccagaagactgaagtgactcacatcagc
aagcttcaggagaaggtagagcaggagatcgctgacctgaagaggaaagacgctgacctg
gagcagctcttacacctgggggatcaaacccagtttctgaacaattacaccctgctgccg
cgtcttagtgaagcttcagactcactcagcatcaacacacgttctcagtctcacaccgag
ggtgcgaccgcagctgtgtcagaggtcagagataaattacaggccattctgagtgacgta
tggagcaaaacctcactgacagaagctggagtagacattttactaccacagtcagagcca
aagacaagaagtgaattcttacaatattcacgtcaactcacactggatccaaacacagca
cacgattgtttatcttgtaagagtagccgtgcacatcataaccattatggtgtatgtcac
aggccaggatttccccaacatccagacagatttattagctggtctcaggttttgtgtaga
gaacacctgagtggacgttgctactgggaggtggagtggagtggatgtgaagtttttgta
gcagtggcatacaaggatattagcagagaaggaagagaaagtgtgtttggaaacaatgtg
aagtcttgggccttacagtgtttcagtgatagttttgaattcagacataacaacatcaga
acgtccatctcaggtcctccatcctccacgataggagtgtacctggatcatcatgcaggt
attctgtccttctacagcatctctgacaccatgactctcctccacagagtccagaccacc
tttactcagccactctgtcctggacttggtttgttttataatagagcctatgctggaatg
tggggagacatggaagactga
DBGET
integrated database retrieval system
