Acanthopagrus latus (yellowfin seabream): 119029846
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Entry
119029846 CDS
T08233
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119029846
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119029846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_5
zf-RING_10
Prok-RING_4
U-box
zf-RING_6
Gp58
Motif
Other DBs
NCBI-GeneID:
119029846
NCBI-ProteinID:
XP_036972899
EnsemblRapid:
ENSALTG00010006289
LinkDB
All DBs
Position
12:24953443..24957629
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AA seq
550 aa
AA seq
DB search
MAQKAVHLDRETFSCLICLDLLKDPVTIPCGHSYCKNCIKDNWDTEDEKRIYSCPQCRKH
FTPRPELLKNTMLAALVEELNKTGLQAAPADLCYAGPEDVACDVCTGRKLRAVKSCLVCL
ASYCEKHLQPHYQSATFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQYICYRCSVEE
HKDHDTVSAAGKRQRELGESRRKIQQRIQDREEDVKLLQQEVEAINGSADKAVEHNEKIF
AQLFCVMEKRNSDVKQQVRSQQETEVRRVKELQETLEQEITELKKLSHTEDHNQFLHNYP
SLSALSESTHSSSINIRPLKYFEDVTAAVSEVRDKLQDVLRQTGTTISLTETQVDVSPSQ
PEPKTRADFLKYSCDITLDPNTAYTRLLLYKGNRKVTVRRRPQSYPDHPDRFTWWPQVLS
RESLTGRCYWEVERSEGRVSVAVAYKNISRAGDSEECEFGSNDKSWTLYCFPQPFLHYVF
HHNNVQTSISGPWSSRVGVYLDHSAGILSFYSVSDTMTLLHRVQTIFRQTLYAGLQIDLY
GDSAEFCKLK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaagcagttcatctggaccgagagactttctcttgtctgatctgtttggat
ctactgaaggatccggtgaccattccctgtggacacagctactgcaagaactgtattaaa
gacaactgggacacagaggatgagaagaggatctacagctgccctcagtgtaggaagcac
ttcacaccgaggcctgagctgctgaaaaacaccatgttagcagctttagtggaggagctg
aataagactggactccaagctgctcctgctgatctctgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagcagttaagtcctgtctggtctgtctg
gcctcttactgtgagaaacacctccagcctcattatcagtcagctacattcaaaaaacac
aagctggtggagccatccaagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgtactgatcagcagtatatctgttatcgctgctctgtggaggaa
cataaagaccacgacacagtgtcagctgcaggaaagaggcagagagagctgggggagagt
cgacgcaagatccagcagagaatccaggacagagaggaagatgtgaagctgcttcaacag
gaggtggaggccatcaatggctctgctgataaagcagtggagcacaatgagaagatcttt
gcccagctgttctgtgttatggagaaaagaaactctgatgtgaagcagcaggtcagatct
cagcaggaaactgaagtgagacgagtcaaagagcttcaggagacgctggagcaggagatc
actgagctgaagaagctctcacacacagaggatcacaaccagtttctacacaactacccc
tcactgtcagcactcagtgagtctacacactcatccagcatcaacatccgtcctctcaag
tactttgaggatgtgacagcagctgtgtcagaggtcagagacaaactacaggacgtcctg
agacagacgggcacaaccatctcactgacagagactcaagtggatgtttcaccgtcacaa
ccagagcccaagaccagagctgacttcttaaaatattcatgtgatatcacactagatcca
aacacagcatacacacgtctgttattgtataaagggaacaggaaagtaacagtcaggcga
cgacctcaatcttatcctgatcatccagacagattcacttggtggcctcaggtcctgagt
agagagagtctgactggacgttgttactgggaggttgagaggagcgagggaagagttagt
gtagcagtcgcatacaagaatatcagcagagcaggggactcagaggaatgtgaatttgga
tccaatgacaaatcctggactttatattgtttcccacaacctttcttacattatgtcttt
catcacaacaatgtccaaacttccatctcaggtccttggtcctccagagttggagtgtac
ctggatcacagtgcaggtattctgtccttctacagcgtctctgacaccatgactctcctc
cacagagtccagaccatattccgtcagactctctatgctggacttcagatagacttatat
ggagactctgctgagttttgtaaactcaaatag
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