Agromyces larvae: MTO99_16335
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Entry
MTO99_16335 CDS
T09195
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
alav
Agromyces larvae
Pathway
alav03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
alav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MTO99_16335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alav03400
]
MTO99_16335
Enzymes [BR:
alav01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MTO99_16335
DNA repair and recombination proteins [BR:
alav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MTO99_16335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
UOE43719
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Position
3428302..3430746
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AA seq
814 aa
AA seq
DB search
MAAGEERQTVEVDGRMLRLTNLGKVMYPSTGMTKGEVVSYYAQIAPVMVPVVAGRPVTRK
RWVHGVGTADAPGDVFFEKNLAEHAPEWVRRGTIRHSDGPKDYPIADDRATLVWLAQQAS
LEVHVPQWRFRPDGSAGDPDRLVFDLDPGEGMGLVECAEVARLVRDILQPIGLDPIPVTS
GSKGIHLYAALDGSQTSQQASEVAHELARALEADHPDLIVSSMRKTLRTGRVLIDWSQNN
ANKTTIAPYSLRGRLRPTVAAPRTWDELDDPGLRQLEWTEVLARVADGVDPFAPISRVGG
GGPLATYLAMRSADATPEPMPASAWAVPNDGTPRFTIQDHHARAHHFDLRLERDGVLKSW
AVPKGVPETSGTNHLAVQTEDHPIEYLTFEGTIPTGEYGAGSMTVWETGTYDAEKWRDDE
IIATLTGRPGGPLGTVRLALIRTDGEGEKSSWLLHRMKEQPAAPAVGRPSTSSGSPRPKP
AEPSKPAEPVEAEPHPTLRPMLATPGTAGLVSGGGWALEWKWDGIRVLARVEDGEVRLTS
RSGRDETARYPELAGLADALRADAVVDGELVALDEKGRPSFERMQPRMNVVDAREIAGLV
ASVPVRLLLFDVLEIAGIPTVDEPYEQRRARLEKLLRRRPEVPVEVPPQADGTPADALAE
AARRGYEGVVAKRLGSRYRPGVRSPDWVKLKLSRTQEVVVGGYRRGIGSRTGKIRSLLVG
IPGEDGRLEYVGRVGSGIGERQSAELLATLRELETDASPFVVVPAADVADAQWVEPVLVG
ELEFGEWTSTGVARHPRWRGLRPDKSPGDVVRET
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgggggaggaacgccagacggtcgaggtcgacgggcggatgctgcgcctcacg
aacctcggcaaggtcatgtatccctccacgggcatgaccaagggcgaggtcgtgtcgtac
tacgcgcagatcgcgccggtgatggttccggtggtcgcgggccggccggtcacgcgcaag
cgctgggtgcacggggtcggaaccgcggatgccccgggcgacgtgttcttcgagaagaac
ctcgccgagcacgcacccgagtgggtgcggcgcggcaccatccgccattccgacggcccg
aaggactacccgatcgccgacgaccgggcgaccctggtgtggctcgcgcagcaggcgtcg
ctcgaggtgcatgtgccgcagtggcggttccggcccgacgggtcggcgggcgaccccgac
cggttggtgttcgacctcgatccgggcgagggcatgggtttggtcgagtgcgccgaggtg
gcgcggctggtgcgagacatcctgcagcccatcgggctcgacccgatcccggtgaccagc
ggcagcaagggcatccacctgtacgcggcgctcgacggttcgcagacctcgcagcaggcg
tcggaggtcgcgcacgagctggcccgcgcgctcgaggccgaccaccccgacctcatcgtg
tcgagcatgcgcaagacgctgcgcaccggccgggtgctcatcgactggagccagaacaac
gcgaacaagaccacgatcgccccgtattcgctgcgcggccggttgcggccgacggtcgcg
gccccgcgcacctgggacgagctggatgacccggggctgcgccaactcgagtggacggag
gtgctcgcccgagtggccgacggcgtcgacccgttcgcgccgatctcgcgggtgggcggc
gggggtccgcttgcgacgtacctcgcgatgcgcagcgcggatgccacgcccgagcccatg
cccgcatcggcatgggcggtgccgaacgacggaaccccgcggttcacgatccaggaccac
cacgcgagggcgcaccacttcgacctgcggctcgagcgcgacggcgtgctgaagagctgg
gcggtgccgaagggcgtgcccgagacatccggcacgaaccatctggcggtgcagaccgaa
gaccacccgatcgagtacctgacgttcgagggaacgatcccgacgggcgagtacggcgcc
ggctcgatgacggtgtgggagaccggtacgtacgatgccgagaaatggcgcgacgacgag
atcatcgcgacgctgaccgggcgcccgggcgggccgctcggcacggtgcggctcgcgctc
atccgcaccgacggcgagggcgagaagtcgagctggctgctgcaccgcatgaaggagcag
cccgcggcaccggcggtcgggcgcccttcgaccagctcagggagccctcgaccgaagccc
gccgagccgtcgaagcccgctgagcctgtcgaagcggagccgcacccgacgctgcggccg
atgctcgccacaccgggcacggcggggctcgtgtcgggcggcgggtgggcgctggagtgg
aagtgggacggcatccgggtgctcgcccgggtcgaggacggcgaggtgcggctcaccagc
cgcagcggccgggacgagacggcgcgctaccccgaactcgctgggctcgccgacgcgctg
cgcgccgacgcggtcgtcgacggcgagctggtcgcgctcgacgagaagggtcggccgagc
ttcgagcggatgcagcccaggatgaacgtcgtcgacgcgcgcgagatcgcggggctcgtg
gcatccgtgccggttcgtctgctgctcttcgacgtgctcgagatcgcgggaatcccgacg
gtcgacgaaccgtacgagcagcgccgcgcacgcctcgagaagctgctgcgccgccgcccc
gaggtgcccgtcgaggtgccgccgcaggccgacggcacgccggccgacgcgctcgccgag
gccgcccgacggggatacgagggcgtcgtcgcgaaacggctcgggtcgcggtaccgcccg
ggcgtgcgcagccccgactgggtgaagctgaagctcagccgcacgcaggaggtcgtcgtc
ggcgggtaccggcggggcatcggctccaggacgggcaagatccgctcgctgctcgtcggc
atccccggcgaggacggccggctcgagtacgtcggccgggtgggcagcggcatcggcgag
cggcagtccgccgagctgctcgccacgctgcgcgagctcgagacggatgcctcgcccttc
gtcgtggtgcccgccgccgacgtcgccgacgcgcagtgggtggaaccggtgctcgtcggc
gaactcgagttcggggagtggacgagcaccggggtggcgaggcatccgcgctggcggggt
ctgcggcccgacaagtcgcccggcgacgtcgtgcgcgagacctga
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