Alteromonas sp. Mac1: AV939_10015
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Entry
AV939_10015 CDS
T05687
Name
(GenBank) Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
ale
Alteromonas sp. Mac1
Pathway
ale02020
Two-component system
ale02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AV939_10015
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AV939_10015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ale03000
]
AV939_10015
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ale02035
]
AV939_10015
Transcription factors [BR:
ale03000
]
Prokaryotic type
Helix-turn-helix
Other families
AV939_10015
Bacterial motility proteins [BR:
ale02035
]
Flagellar system
Flagellar assembly proteins
Others
AV939_10015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
AAA_16
Mg_chelatase
AAA
AAA_7
bpMoxR
AAA_19
AAA_2
Ribophorin_II
Motif
Other DBs
NCBI-ProteinID:
AMJ86879
LinkDB
All DBs
Position
complement(2348639..2350090)
Genome browser
AA seq
483 aa
AA seq
DB search
MKDILLVSDSQELIHSLETIVTFLGESCQSRGLSDCESYLKEKGADAVLIEYASPSVINS
LVARFPHIPFVAILHSNGEVAASCNLVSVITLPLTYPVLTQSIHRCQEYSRRKPGKTRAG
GSKTRLFRSLVGKSDEIQIVRRLVEQVAPTEATVLILGESGTGKEVVARNVHFLSERKDG
PFIPVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAEGGTLFLDEIGDMPLQMQV
KLLRVLQERIYERVGGSKPLQCNVRIIAATHRHLETMIKEDKFREDLYYRLNVFPIDSPA
LRQRKDDIPLLLQELNSRIQGDGVDSVRFTERAIASLMEHNWAGNVRELSNLVERLSILY
PGQIVDVADLPEKYQYGEIQAYEPDYPEELLERDAFNALFAESASQEHFDEPEEENSLPL
SSSLPEEGVNLKEYLSELEITLIRQALEQQEWVVARAADKLGMRRTTLVEKMRKYDIQRM
EEV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatattttgctggttagtgatagccaggaactaattcatagcttagaaaccata
gtcacctttttgggagagtcgtgtcagtcacgagggctttctgactgtgaaagttacctg
aaagaaaagggcgcagatgcggtacttattgagtacgcgtcgccgtcagtgataaattca
ctggttgctcgttttccacacataccattcgttgccattttacattcaaatggcgaagta
gccgcgtcgtgcaatttagtcagcgtgatcaccttaccgcttacttacccagtacttacg
caatcaattcaccgatgccaagaatatagtcgcagaaagccgggtaaaacacgtgctggt
ggctctaaaacgcgtctttttagaagtttggttggtaagagcgacgaaattcagattgta
cgccgtttagtagagcaagtagctccaacagaggctacagtgctgattttgggcgaatct
ggtacaggtaaagaggtggtggcacgtaatgtacatttcttgtcagaacgtaaagacggc
ccttttattcctgttaactgcggtgctattcccggcgagctacttgaaagtgaattgttt
ggtcacgaaaaaggcgcgtttaccggtgcaataagtgctcgtaaaggccgttttgagtta
gccgaaggcggaacattatttctagatgaaattggcgacatgccgttgcagatgcaagtc
aaactgcttcgggtgctgcaagagcgtatttatgagcgagtaggcggcagtaagcctcta
caatgcaacgttcgtattattgcggctacccatcgtcatctagaaactatgatcaaagaa
gataagtttcgtgaagatctctattaccgcttaaatgtgttccctatcgatagccccgcg
ttacgtcagcgtaaagatgacattcccttgctattgcaagaactcaacagtcgtattcaa
ggtgatggtgtagatagcgtacgtttcactgagcgcgccattgcatcgttaatggagcat
aactgggcgggtaacgtacgagagctatcaaaccttgttgagcgtttaagtattctttat
cccggtcaaatcgttgatgtggccgaccttccagagaaataccagtacggtgagattcaa
gcgtacgaaccagattaccctgaagaattgttagagcgagatgcgtttaatgcgcttttt
gccgaatcagcctctcaagagcactttgacgagcctgaggaagagaacagtttgccgctt
tcctcgtcgttgcctgaggaaggggttaatctgaaagaatacttatctgaacttgaaatt
accctcattcgccaagcgttagaacaacaagaatgggttgtcgctcgcgctgccgataag
cttggaatgcgaagaaccacgcttgttgagaagatgcgtaagtacgacattcaacgcatg
gaagaagtttaa
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