Austrofundulus limnaeus (annual killifish): 106511541
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Entry
106511541 CDS
T06063
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alim01002
]
106511541 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106511541 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106511541 (usp13)
Enzymes [BR:
alim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106511541 (usp13)
Peptidases and inhibitors [BR:
alim01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106511541 (usp13)
Ubiquitin system [BR:
alim04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106511541 (usp13)
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106511541 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
106511541
NCBI-ProteinID:
XP_013855758
UniProt:
A0A2I4AJU4
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPKTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRKNGKVFLDLELNRDFNGDDYEYEDEAKI
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSRHARSLRQLD
NGVRIPPNGWKCQKCEMKENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRETNXPLAVK
LDTITPDGADVYSFEEEEAVLDPHISEHLSHFGIDMLQMQKRTENGHHTDNNSRPRVSEW
EVIQESGMKLKAVFGSGFTGIKNLGNNCYLSTVLQVLFSIPDFQRMYVGNLQRIFDYSPL
DPTQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKVLNGHQQRGISPRMFKALV
SRGHPEFSSNRQQDAHEFLLHLINLVERNSAGSENPSDVFRFLVEERVQCCQTRRVRYTQ
RVDYCIQLPAPIEAATNREELLAYEVKRKEAEENMRALPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTCRFASFPEYLIVQIKKFTFGVDWVPKKLDLAIDVPDFLDLSR
LRATGLQAGEEELPDLMPPIVLPEDIRDNSMSSTDSPEIDEAAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMMDSAPPTSDSTLGATSLGNAPPEESV
AILTSMGFPRSHSINALKATNNNLERALDWIFTHPEEEESDALSDMADTEPNDNPFSNTN
SHSDSTLSPDRDLSGPRVKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWVIYNDHK
VCLSERPPKDLGYIYFYHRLSSS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctgggagagctgctggtcccttacatgcccaccatcagagtcccgaaa
acaggagacagggttttcaagagcgagtgcgccttctccttcgactctccggagtctgag
ggaggcctgtatgtgtgcatgaacacattcctgggcttcggacgtgagcacgtggagaga
cattatcgcaaaacaggacagagcgtttacatgcacctcaaacggcacgtcaaagagaaa
gccacaggcgcagcaggaggtgctatccccagaagaaaaaatggaaaagtgttcctagat
ttagagctaaaccgtgattttaatggagacgactatgaatacgaagatgaggccaagatc
gtcatttttccagaccactttgagattcctttaccaaatatcgaggagttgcccgctctg
gtgaccatcgcctgtgacgcagtactcaacgcaccatcagcttacaaraaacaggagcct
gagtcctgggaggaggagatccaggtctccaggcacgccagaagcctcagacagctggac
aacggggttcgaattccacccaatggctggaagtgtcagaaatgtgagatgaaagagaac
ctgtggctgaacctgaccgatgggtcggtgctctgtgggaagtggttcttcgacgggagc
ggagggaacggccatgccctggagcactacagagagaccaacwaccccctggctgtgaaa
ctggacaccatcaccccagacggagcagatgtttattcatttgaggaggaagaagctgtg
ttggaccctcacatatcagagcacttgtcacactttggaatagacatgctacagatgcag
aaaagaacagaaaatgggcaccacacagacaataactcccggccacgggtcagtgaatgg
gaggtgatccaggagtccggtatgaagctgaaagcagtgtttggttctggtttcacgggc
atcaagaatctgggcaacaactgctacctgagcacagtactccaagtcctcttcagcatc
ccrgacttccagaggatgtatgtgggcaatcttcaaaggatattcgactattcacccctt
gaccccacacaggacttcgccactcagatggctaaactgggacacgggctgctctcaggc
cagtactccaaaccacccatgaaatctgagcttattgaacaggtgatgaaagaagaacac
aaagtattaaacgggcaccagcagaggggcatctctcctcgaatgttcaaagccctggtt
agcaggggacacccagagttttcctccaacagacaacaagatgcccacgagttcctcctg
cacctcatcaacctggtggagaggaacagtgccggctcggagaatccaagcgatgttttc
cgcttcctggtggaggagagagttcagtgctgtcagacacgtcgggttcgttacactcag
agggttgactactgcatccagctgccagctcccatcgaggcagccaccaatcgagaggag
ctgctggcttatgaagtcaagagaaaagaagctgaggagaacatgcgggctctcccagaa
ccggtgcgagcacgcatccctttcactgcatgtctgcaggctttcacagaaccagaaaat
gtcccagacttctggagctcagcgctgcaggccaagtcagctggagtcaaaacgtgccgt
tttgcctcgttcccagagtatctgattgtgcagataaagaaattcacgtttggtgttgac
tgggttccaaagaaactcgacttggccatcgatgttccagactttctggatttaagccgt
ctccgagccacagggctgcaggcaggtgaagaggagctgcctgatctcatgcctcctatt
gtgttgccygaagacatcagagataactccatgagctcaacagactctccggagatcgat
gaggcagcagttatgcagctggcagagatgggctttccactggaggcctgcagaaaggcg
gtgtattacaccggcaacatgggcccggagatggcattcaactggatcatagcccacatg
gaggagcctgactttgcagaaccactcactctgccctccatgatggactctgctcccccc
acaagtgacagcacattgggggccacttcactgggaaacgcgcccccagaggagagcgtc
gccatcctcacgtcaatgggcttccctcgctctcacagcatcaacgcactcaaagccaca
aacaataatctggaacgagcactcgactggatcttcacccacccagaggaggaggagagc
gacgccctttcagatatggccgacacagagcccaacgacaaccccttctccaacaccaac
tctcacagcgactccacactgtctccagaccgagacctgtcaggcccccgagtcaaagac
ggcccgggacgatatgaactgtttgccttcatcagtcacatgggagcatctacaatgtct
ggacattatgtttgtcacatcaaaaaggaaggaaggtgggtgatctacaacgaccacaaa
gtgtgtttgtcagaaaggcctccaaaagacttgggctacatctacttttaccaccgactt
tctagcagttaa
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