Austrofundulus limnaeus (annual killifish): 106513379
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Entry
106513379 CDS
T06063
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106513379
Membrane trafficking [BR:
alim04131
]
Protein recycling
Others
Others
106513379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
106513379
NCBI-ProteinID:
XP_013857633
UniProt:
A0A2I4AQ75
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
METRVGHCHFVIFSEWICLFIITSIQGGTDAEVTCIPSCQLPPIEASSREPWLLDLSDFS
AAPAEELVGFGAELPRWEEEHSXAELSEESLPEVQPRLEENKTSGPQRDALNDLGKLSHP
SPSDPTPSNVTQNRTGDGRNDRFSFPSGNVPSWRRPRSAETWSGFGTEGVGEDPDREEFR
LTSSTFALAGDTAHNQAMVHWSGQNSSVILMLTKFYDFNSGRVTQSSLWRSTDYGTTYEK
LNEKVGTKSILSYLYVSPNNKRKIMLLTDPEVESSLLISLDEGASYQKHSLAFDILSLLF
HPEQEDWILAYSHDQKLYVSVEFGRRWQLVQDNVVPNRFYWSRLGLDKEQGMIHLEISFS
EKRSQYITCKLLNCSDGNKGKPFPGFIIPNSLVVQDEYVFIQVSIGGQTVHYVSYKRNAF
YPMKLPKYTVPKDLQIISTDDNQVVAAIQDWHQNDSYNLYMSEHRGLFFTLMLEDVVSSG
GPEDNIMIDLYEVAGIKGVFLSNKVVENQVRTYITYNKGRDWRLLQAPTTDLQGNKVYCE
QPYCSLHLHLHVSENPYASGNIVSKDTAPGIIIASGVVGPELTSANVSIFITSDAGNTWR
EIFQEEYSVFFLNQGGSLVAIRHTPLPIRHIWLSFDEGRNWDKYSFTSFPLYVDGVLGEP
GEDILIMTIFGHFSHRSEWQLVKIDFRPIFEQRCTSEDYFTWQLHNEGEVCIMGMKRIFQ
KLRANAQCVKARDQYISQMSDSCPCTEADFECDYGFERQIDGSCTPAFWFAPSATARDCI
TGDTFLNTTGYRKALTNNCTEGSVLKYSPRHQKCPSQAPRGLQLFTSEGTLVATLGRNVT
FLVFLEEGLGSMTSITVDFGDGTAISYVNISSIEDGVKHIYGKVGIYQVSATASNNLGLD
RVVLYLHVSCQLEQVQLSAPSVVVKNKAVNFTTALHPSNVGTVTYFWWFENKTEPVVTLD
GATSFTFSKEGSHTVTVQASAGTTVHQDQSTVAVYDYFRSHSLAFSSNLDELNPGVSEWR
EDISRVVKSCMVQVTGISENQLLVTVLPGLPTTAEVFVVPERRSKGRAINEQWTHLDQLS
QVLLSALNQDLVQFALRPGVQVNVFATRLSPAPLVDSSDSGYSSTAVIMLVSVALMGLVI
FVIYKFKRKIPGMNTYTAEQPDKEQEVIPTVTSIAVPNPEGDSLTSLDHVDTQXNSKNRG
YLPSHTDINLSDEAPHVF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcgcgtcggtcactgccattttgtcattttctcggagtggatttgcctcttc
ataataacttccatccagggcggaacggacgcagaggtaacgtgcatcccctcgtgccag
ctgccgccgattgaggcatcatcccgggaaccgtggctgctggatttgagcgattttagc
gcggcacctgccgaggaactggtcgggtttggtgcggagttgccccgctgggaggaagag
cacagcsctgcggagctgagcgaagaaagtttacccgaagtccagccacggctggaggaa
aataagaccagcggtccgcagagagacgctttraatgacctcgggaaactttcccaccct
tccccaagtgatccaactcccagcaacgtgacccagaatcgcaccggggatggaagaaac
gaccgtttttcttttccgagcgggaacgtgccgagttggagacgaccgcggagygcggag
acctggtccggattcggaaccgagggcgtcggcgaggatccggaccgggaggagtttcgt
ctcacgagttcgacttttgcgctcgccggggacacggctcacaaccaggcgatggtgcac
tggtccggccaaaacagcagcgtgattctcatgttgaccaaattctacgacttcaactcc
ggcagagtaacacagagttctttgtggaggtcaactgattatgggaccacatatgaaaaa
cttaatgagaaagtcgggaccaaaagcattctaagctacttgtatgtgagtccgaacaac
aaaaggaagatcatgttactaactgacccagaggtggagagcagcctgctcattagcctt
gacgagggggcgtcctatcagaaacacagcttagcctttgatatccttagyctgcttttt
caccctgagcaagaggactggatcctggcttacagccatgaccaaaagctttacgtctca
gttgagtttgggaggagatggcaacttgtgcaagacaacgttgttcccaacaggttctac
tggtcaagactgggtttggacaaggagcagggcatgattcatctggaaatcagcttttcg
gagaaaaggtcacagtacataacttgcaaacttctgaactgctctgacggaaacaagggc
aagcctttccctggatttataatccccaattcccttgtggtacaggatgaatacgttttc
atccaggtgtcaataggtggscagactgttcattacgtgtcttataaaagaaatgctttc
tacccaatgaaacttcccaaatacacagttcctaaggacttgcaaataatcagcaccgat
gataaccaggtggtggcagcgattcaggactggcatcagaacgattcatacaacctgtac
atgtcagagcacagagggctgttcttcacactgatgctggaggatgttgtgagcagtgga
ggcccagaagacaacatcatgatagacctgtatgaggttgccgggattaaaggagtgttc
ctgtcaaataaagttgttgaaaaccaagtgagaacttatatcacatacaacaagggcaga
gactggcgtcttcttcaggctccaacaaccgatctccagggaaacaaggtctattgtgaa
caaccgtactgctcgctgcacctacaccttcatgtctcggagaacccttacgcctcagga
aacattgtcagcaaagacacggctccgggaattataatagcatcaggtgtggttggacct
gagctaaccagtgcaaatgtcagtatcttcatcacgtctgatgctgggaacacatggaga
gagatttttcaggaagagtacagtgtgtttttcctgaatcaaggagggtctctggtggcc
atccgacacacacctctgccaattagacacatttggctgagttttgatgagggcagaaac
tgggacaaatatagcttcacctcctttccgctctacgttgatggggtgctgggggagcct
ggagaggacatcctcatcatgacaatatttggtcattttagtcatcgatctgagtggcaa
cttgtcaagattgactttcggcccattttcgaacaacggtgcacatccgaagactatttc
acatggcagttgcacaatgagggggaagtgtgcattatgggaatgaagagaatcttccaa
aaactgagagcaaacgctcaatgtgtgaaggcccgagatcagtatatttctcagatgtca
gactcctgcccgtgcacagaagcagacttcgagtgtgactatggctttgagaggcagatt
gatgggagctgcaccccggctttttggttcgctccatcagcaacagctcgagactgcata
acaggagacacctttctcaacacaacgggataccgcaaggctttgacgaacaactgcact
gagggaagtgtgctgaagtacagcccgaggcaccaaaagtgtcccagtcaggctcccaga
ggcctccagctcttcaccagcgagggaacacttgtagccacgctggggaggaatgtcacc
ttcttggtttttctggaagagggtcttggctccatgacaagcataacggtggacttcgga
gacggaacggccatatcttacgttaacataagctctatcgaagacggggtcaagcacatt
tacggcaaagttgggatctaccaagtttcggccacagcgagcaacaatctcggcctggac
agggtcgttctctaccttcatgtttcctgtcaacttgagcaagtgcagctctcggctcct
tcggtggttgtcaagaacaaagcagtgaatttcactacagccttgcacccgagtaacgtg
ggaaccgtcacttatttctggtggtttgagaacaaaacggagcctgtcgtgaccctcgat
ggagccacttctttcactttctccaaggagggaagccacactgttactgttcaggcttca
gctggtactactgtccatcaggaccaaagtactgtagcagtctatgattatttccgctcg
cattctttggccttttcatctaatctggacgagctgaaccccggggtgtctgagtggaga
gaagacatcagcagagttgtaaaaagctgcatggtccaggtcacaggaatcagtgagaat
cagctcttggtcacggtgcttcctggtttaccgactacagctgaagtttttgttgtacca
gagaggaggtcaaaaggcagagccataaatgaacaatggacccacctggatcagctttcc
caggtgctgctaagtgctctgaaccaagacctggttcagtttgcactcaggccgggggtg
caggtgaacgtgttcgccacacgattgtctccagctcctcttgtggacagcagtgacagt
ggttacagcagcactgcggtcatcatgctcgtgtcagtggcactgatgggcttggtcatc
tttgtaatatataaatttaaaaggaagatcccaggcatgaacacttacacggcggagcag
ccggataaagaacaagaggtcatccccacagtgacctccatagccgtcccaaaccctgag
ggggacagcctgacctccctggaccatgtggatacacagmtgaactcaaaaaacagaggc
tacctgccatctcacacagacatcaacctctctgatgaagcgccccatgtgttttaa
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