Austrofundulus limnaeus (annual killifish): 106518516
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Entry
106518516 CDS
T06063
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106518516 (tmf1)
Membrane trafficking [BR:
alim04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106518516 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
106518516
NCBI-ProteinID:
XP_013865298
UniProt:
A0A2I4BC58
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MSWFNASHLSTFAKQALTTAQKSIDRVLDIKEEDQWGDTTIMPYDDVTVPGKLSVSGGWG
MMQWEAPAEEKTITPPASSEAITTPVTRTVVDETDNFFSAFLSPGDTQTATQSKVVSVPP
AKSQRRPQEKEKTSETAVLQVQTDAQSEGPVENADASSENQIVAEKEPDETKSSPAPSCA
DTILLHPVSPVSSPSDLPFNPDSKLSSGETDNDSSVSVESKTEQPDTSEHQPEDTASSPE
PSPPDAKSCTPSDPSPSTSSKEVLSAHKDTKAEDRQNDTPSPPVSAFSSGTSTTSDIEVL
DHESVLSESSASSRQETGEGKTGLHLMQGSFQLLTASTCGDFPRLEDYPKLTESCGSSSD
AFERIDSFSVQSLDSRSVSEVNSDDEIPGSQTLASVTAAGPASLTASCPKQEDVAAEKVG
EEEEEEDEEEVYVETARKQSLDEMEESGRSATPVNSEQPEELAELGDDVSQFDSTCKAEE
RSAPPITEEMKSVSTVQILEFQKVIDDLSSRLEKRESQLLAVSKDKAKLEEECDNLKDEL
INLKEESSTVQSLKDEFTQRIADTERKAQLACKERDIAKKEIKGLREELSTRLNSSDTME
LIRDKEEQIRGLLEEGEKLSKQQLQQSNIIKKLRVKEKESDGKIIKQQKKIKEQEEELKH
LQLVLDGKEEVEKQHRENIRKLNSVVEQQEKELSRLQVDTDELQEKNRSLQAALDNSYKE
LAELHKVNASRASEAEEAALSRETQAKELLSVALEKAQEEARIQQEALANQVADLRLALQ
RAEQQQARKEDYLREEISELQQRLQEAETRNQELSQSVTSATRPLLRQIENLQASLGGQT
ASWEKLEKSFSDRLAEAQVQLAVAVEKERSATEELLSIKSQLASLDSQNSLLRQEKARVV
AQLEAEKNKREKLEDDSSREHAELINLRGEHSRMQEETKKEKLLLTNQLEMEKMKVEQEK
KKCYLAQEALKEKERKALTLSGEPPASSTPSLSRSSSISGAENAGLHTSVLSQDDSFDHS
MGTMTMSMSSGTNLYEAARLSGGSSIIENLQSQLKLREGEIAQLQLEIANLERSRSVMAE
ELVRLTNQNDEMDEKVKEIPKLKVQLKDLEQRHNTILQMYGEKAEEAEELRLDLEDVKNM
YKTQIDELLKNQK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcttctcacctgtccaccttcgctaaacaagctttaacaacagcc
cagaagtcaattgaccgtgttctggacatcaaagaggaggaccagtggggtgacacaact
ataatgccctatgacgatgttactgtacccggcaagctttcagtcagtggaggatggggt
atgatgcagtgggaggcacctgctgaagaaaagaccatcacacctcctgcttcgtcagag
gccattactacgcctgtcactcgcactgttgtagatgaaaccgataactttttcagtgcc
ttcctgtctcctggagatacacaaactgcgacccaaagtaaggttgtgtcagtaccccct
gctaagtctcaaagacggcctcaggagaaggagaagacaagtgaaacggctgtgcttcag
gtccaaacagatgcgcagagtgaagggccagtggaaaatgctgacgcgagttctgagaac
cagatagttgctgagaaggagcccgatgagaccaaatcatcccctgcaccgtcttgtgct
gacactattctcctccatccggtttctcccgtttcttctcccagtgatctcccttttaac
cctgacagtaaactgagctctggtgagacagacaatgactcttcagtttctgtggaatcg
aagacggagcagccagacacatctgaacaccaaccagaggataccgcaagttctcctgaa
ccgtctcctcctgacgcaaagagctgtaccccttcagatccctcgccctccacatcctcc
aaggaagtactttccgctcataaagacacgaaggcggaggatcgtcaaaacgacacaccc
tcccctccagttagtgctttctcctcaggaacctccaccactagtgacattgaagtgctt
gaccatgaaagtgtgttgagcgagagctcggccagctctcgacaagaaacgggcgagggc
aaaaccggccttcatttgatgcagggctccttccagcttctcaccgcctccacctgtgga
gatttcccccgactcgaggattaccccaaactcacggagagctgcggttcctcctcggac
gcgttcgagcgcatcgactcgttcagcgtgcagtcgctggacagccggagcgtcagcgag
gtcaactcggacgacgagatccctggcagtcagactctggcttccgtcaccgccgcgggc
cccgcctctttgacggcgtcgtgtccgaagcaggaggatgtggcggcagagaaggtgggg
gaagaggaggaggaggaagatgaagaggaggtctacgttgagacggcgaggaagcagtcg
ctggatgagatggaggaaagcggacggagtgcgacacctgtgaacagtgagcagcctgag
gagctggccgaactgggagatgacgtctcgcagtttgattccacctgtaaggctgaagaa
aggagtgctccaccaatcacagaagagatgaaaagtgtctcaactgttcagatattagag
tttcaaaaggtcattgatgacttgtcaagtcgtcttgagaaaagggagtctcagctgctg
gcagtgagcaaagacaaggccaagttggaggaggagtgcgacaacttgaaggacgagtta
ataaatttgaaggaagagagctccactgtgcagtccttaaaggatgagttcacacaacgc
atagcagatacagaaaggaaggctcagctggcctgcaaggagcgagacatagccaagaag
gaaataaaaggattgcgagaagagctttctacgagactgaactccagcgatacaatggag
ctcatcagagataaagaagagcagatcagaggtttgctggaagaaggtgaaaagctgtca
aaacagcagctgcagcagagtaacatcatcaagaaactgcgtgtgaaggagaaggagagc
gacggaaagatcataaaacagcagaagaaaatcaaagagcaagaggaagagcttaagcac
ctgcagctggttttagatgggaaggaggaggtggagaagcagcacagggagaacatcagg
aaactgaactccgtggtggagcagcaggagaaggagctgagccggctgcaggtggacacg
gacgagctgcaggagaaaaaccgaagccttcaagctgccctcgacaactcttacaaggag
ctggcagagcttcacaaggtgaacgccagcagagccagcgaggccgaggaggcagctctg
agcagagaaactcaggccaaggagctgttgagtgtcgctctggagaaggctcaggaggag
gcgaggattcagcaggaggcactggccaaccaggtggctgacctgaggcttgccctgcag
agggctgagcaacagcaggcaagaaaagaagattatttgcgggaagagatcagtgagctt
cagcagagactgcaggaggcagagaccaggaaccaggagctcagccagagtgtcacctcc
gctacacggccattactgagacaaattgagaacttacaggcctcgctgggtggacaaact
gcatcctgggaaaaactggagaagtccttctctgaccgcctcgcggaggcccaggtgcag
ctggctgtcgccgtggagaaagagcgatcagcaacagaggaactcttatccatcaagtct
cagctggcctctctggactcccagaattctttgctccgccaggaaaaggccagagttgtg
gcacagctggaggctgaaaaaaacaagagagagaaactggaggatgacagcagcagagag
catgctgagttgataaatctgcgaggagagcacagtcgcatgcaggaagaaaccaaaaaa
gaaaagctgctgttgaccaaccagcttgagatggagaagatgaaggtggagcaggagaag
aagaaatgctacttggcacaagaagcactaaaggaaaaggagcggaaggcgttgacactc
tctggcgagcccccagcatcctccaccccatccttgtcccgctcgagctccatcagcggg
gctgaaaatgctgggctgcacacctctgttctgtcccaggatgactcttttgaccactca
atgggaacaatgaccatgtctatgtcgagtggaaccaacctgtatgaggcagccagattg
tccggaggctccagcatcatagagaacctccagtctcagctcaaactgagagaaggagaa
atagctcagctgcagctcgagattgccaatttggagaggagtcgctctgtgatggcagag
gagctagttcgactcacaaaccaaaacgatgaaatggatgagaaggtgaaggaaatcccc
aagctgaaagttcagctcaaggacctggagcagaggcacaacactattctgcagatgtac
ggagagaaggccgaagaagcagaggaactgaggctggacctggaggatgtaaagaacatg
tataaaacacagattgatgaattgctgaagaatcagaaataa
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