Austrofundulus limnaeus (annual killifish): 106531297
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Entry
106531297 CDS
T06063
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alim01002
]
106531297 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106531297 (usp47)
Enzymes [BR:
alim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106531297 (usp47)
Peptidases and inhibitors [BR:
alim01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106531297 (usp47)
Ubiquitin system [BR:
alim04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106531297 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
106531297
NCBI-ProteinID:
XP_013882573
UniProt:
A0A2I4CRG2
LinkDB
All DBs
Position
Unknown
AA seq
1388 aa
AA seq
DB search
MEMVPSEENQFVPKEDVFWRCRQTVFNEMKRISQIQNAAEEPRVLCIIQDITSAKTINER
LTLNLPASTTLSKLYEDVAHKAGYVNDTFDLAWGNVTAMAPLEHNSEMSLSDSGFEPGKK
NFLQLSDKDGEQPQIASVPFITQDESGTADSSGLDDSSQERFIGPLQRDGSAGGSGEYSS
PSYSYSSILSKSETGYVGLVNQAMTCYLNSLLQTLYMTPEFRNALYNWEFEESEEDPVTS
IPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT
EQADLINQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFI
QPETLDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMAF
PEELDMSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSS
TERALKPKSLLTFELFSVMVHSGSAAGGHYYAYIKSFSDGQWYSFNDQHVSKITQDDIRK
TYGGSSGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKVLAVEDFPEHIQSLVQKEKESEE
QEKRQREIERNTCKIKLFCMHPVKMMMESKLEVHKDKTLREATEMSYKLMELEGVIPLEC
CRLVKYDEFHEYLERSYEGEEDTPMGLLLGGVKSSYMFDLLLETRRPEQVFQPYKPGEVM
VKVHVVDLKTETIAPPISVRAYLNQSITEFKQLIAQATGLSAETMRVVLERCYNDLRLLY
VPNKTLKAEGFFRSNKVFVESSELSDHQVPFTDSLLWKLLDRHGNTIRLFILLPEQSPGT
LANRTVCQKVGEDSDGPFEGSKGNRKSVEAILEESTEKLKNLSLQQQQGSSTSDSQKSSD
TSDFEHIESPTQEAVSNSSLCMAADNRELENRIGAAPGGSGGASSDTDNQFVCEERSDSE
VNNDRSTSSVDSDILSSSHSSDTLCNADSCPIQLANGLDSHSITSSRRSKAHEGKKETWD
TAEEDSGTDSEYDDNGKSKAEAQYLYFRAEPYSQDEASWETQKCLVVHVDKRITLAAFKQ
RLEPYVGVMSSQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKV
YQLLVNEPEPCKFLADTVFAKGMTVRQSKEELLPQLKEQCKLDLSIDRVRLRKKTWKNPG
TVFLDYHVYEEDISISSNWEVFLEVLNEPEKMKSMSQLAILTRRWNPATMKLGPFQEVIL
ESSRVDELKEKLSEISDIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLY
ICDDGAVVFYRDSREEPQELSEDERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGG
PLRDPGQD
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaagagaaccagttcgtacccaaagaggatgtgttttggagg
tgcagacagacagtttttaatgaaatgaagaggatttctcagattcagaatgcagctgag
gagcccagagtgctgtgtataatccaggacatcaccagcgcaaaaacgatcaacgagagg
ctcaccctcaacttgcctgcttccacaactctttccaaactttatgaggacgtcgcgcac
aaagctggatatgtgaacgacacctttgatcttgcgtggggaaacgttacagccatggca
ccactggaacataacagcgagatgtccctttctgattctggatttgagcctggcaagaag
aattttctccaactttcagacaaagatggagagcaaccacagattgcatcagttcctttt
ataacgcaggatgaatcaggaacagcagatagcagtggactggatgacagctcccaggag
cgatttattggacctctacaaagagatggcagtgcaggtggcagcggtgaatacagcagt
ccatcatactcctactcttctatcctcagcaaatctgagacaggttacgttggcttggtt
aaccaagctatgacgtgctatttgaacagtcttctgcaaacgctgtatatgaccccagag
ttcagaaatgcactctataactgggaatttgaggagtcagaggaggatcccgtcaccagt
attccataccagctgcagcggctctttgttttgctgcagactagcaagaaacgagcgatc
gagaccactgatgtgacgaggagctttggctgggatagcagcgaggcctggcagcagcat
gacgtccaggagctgtgcagggtcatgtttgatgcccttgagcaaaaatggaagcaaaca
gaacaggctgatctgatcaaccagttgtaccaaggaaagttgaaagactatgtgcgctgc
ttggagtgtggctatgagagctggagaatcgatacatacttggacatccctcttgtgatc
agaccttttggagccagccaagcctacgggagtgtggaggaggctttgcaggcattcatc
cagccggaaactctggacgggcccaaccagtacttctgtgaacgctgcaaaaagaaatgt
gatgctcgaaagggtctgagatttctgcactttccctacctgctgactttacaactaaaa
aggtttgatttcgactacaccactatgcatcgcattaagctaaacgaccgcatggccttc
cccgaggagcttgatatgagtccgttcatcgatgtagaagatgagaagtcgcctcagaca
gagagctgcactgatagtggagcagagaacgaaggcagttgccacagtgaccaaatgagc
aatgatttttccactgacgactgcgtggatgagggcatctgcttggacagcaccagcagc
acagagagggcgttgaagccaaagagcttgctgacctttgagctgttctctgtcatggtc
cattcgggaagtgctgcaggtggtcactactacgcatatatcaagtccttcagtgatggc
cagtggtacagtttcaatgatcaacatgttagtaagatcacccaggatgatatcaggaag
acatatggaggttcctcagggagtagaggctattattccagtgcctttgctagctctaca
aatgcatatatgctgatttatagacttaaagatccctcaaggaatgcaaaggttttagct
gtggaagactttccagagcacatccagagtctggttcagaaggagaaggagtctgaagag
caagaaaagcgccagagggaaattgagcgcaacacttgcaagatcaagcttttctgcatg
catccwgtaaagatgatgatggagagcaagttggaagttcacaaggataaaactctgaga
gaagcaacagaaatgtcctacaagctgatggagctggagggagtcattcctctggagtgc
tgtcgcttggtaaagtacgatgaatttcacgagtatctggagcgatcgtacgaaggcgag
gaagacacaccgatggggctcctcctcggaggcgtcaagtcctcgtacatgtttgacctg
cttcttgagactcgcaggccagagcaagtcttccagccttacaaacctggagaagtgatg
gtgaaggttcatgttgttgatctgaagactgagaccattgcccctccaatcagtgttcga
gcatacttgaaccagtcgattactgaattcaaacagctcatagcacaggctacagggctt
tctgcagaaaccatgcgagtggtcttggagcgctgctataacgacctccggctcctttat
gttccaaacaagacacttaaagctgaaggattctttaggagcaacaaggtttttgtagag
agctccgagttatcagatcatcaggttcctttcactgactcgctcttgtggaaactcttg
gatcgtcacgggaatacgatccgactgttcatcttgctgcctgagcagtctcctggtact
ctggctaatagaactgtttgccaaaaagtgggagaagactccgatggaccctttgagggt
tcaaaaggcaacaggaaatccgtagaagctattctggaggaaagcacagaaaaactgaaa
aacctgtctttgcagcagcagcagggttccagcacaagcgacagccaaaaaagctccgac
accagtgactttgagcacatcgaatccccgacacaagaagccgtctcgaactcttcgctc
tgcatggccgcagacaacagagagctggagaaccggatcggagccgcgcccggtggcagc
ggaggcgcctcttctgacaccgacaaccagttcgtctgcgaggagcggtcggactccgag
gtgaacaacgatcgtagcacaagctcggtggacagcgacatcctgagctccagccacagc
agtgacacgctgtgcaatgcagacagttgccccatccagctggccaacggcttggattca
cacagcatcacaagtagccgacgctccaaagcccacgaggggaaaaaagagacctgggac
actgctgaggaagactctggaacagacagcgagtatgacgacaacggaaagagcaaagca
gaagctcagtacctgtacttcagagcagagccttattctcaggatgaagcctcatgggaa
acacaaaaatgtttagtggttcacgtggacaagagaataacattagcagcattcaaacag
aggttggagccgtacgtcggcgtgatgtcgtcccagttcaaggtgtttcgggtttatgcc
aacaaccaggagtttgagagcgtacggctcaatgaaacactttcatcgttctctgacgat
aacaagataactattcgactagggagagccctgaaaaagggtgaatacagagttaaagtg
tatcagcttctagtaaatgaaccagagccctgcaagttccttgcggacacggtgtttgcc
aagggcatgactgtcagacagtccaaggaggagctgcttcctcagttaaaagagcagtgc
aagcttgacctcagcatcgacagggttcgactcagaaaaaagacatggaagaatccgggc
acagtgtttctggattaccacgtctacgaggaagacatcagcatctcttccaactgggag
gttttcctggaagtccttaacgaaccagagaagatgaagtccatgtcacagctggctatt
ctgactcgaaggtggaatccggctacgatgaagctggggcctttccaggaggtgattctg
gagagcagccgtgtagatgaactcaaagagaagcttagtgaaatcagtgatattccactt
gaaaacctagagtttgcaaagggcaggggaacatttccttgtgacatctcrgtgttggaa
atccatcaggatttggactggaaccctaaggtgtcgacccttaatgtgtggcctctttat
atctgtgacgacggagccgtggtcttctacagggacagcagagaggaaccccaggagctc
tcggaggacgagcgtaacgagttgatgaagaaggagagcagccgactgctgaagacggga
catcgtgtcagttactcaccgcggaaagagaaagccctgaagatctacttggacgggggt
cctctgagagacccggggcaggactga
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integrated database retrieval system
