Austrofundulus limnaeus (annual killifish): 106531760
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Entry
106531760 CDS
T06063
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03022
Basal transcription factors
alim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106531760
09124 Replication and repair
03420 Nucleotide excision repair
106531760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alim03021
]
106531760
03400 DNA repair and recombination proteins [BR:
alim03400
]
106531760
Transcription machinery [BR:
alim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106531760
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106531760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
DZR
Motif
Other DBs
NCBI-GeneID:
106531760
NCBI-ProteinID:
XP_013883134
UniProt:
A0A2I4CT17
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MDEESERAKRWEGGYERTWEVLKEDESGSLKATVEEILYQTKRKRVTESHGQVRLGMMRH
LYVVIDCSRSMEDQDLKPNRLTSTLKLMETFVDEYFDQNPISQVGIIITKNKRAEKLTDL
AGNPKKHMAALKKAVDTSCVGEPSLYNSLNLALQTLRHMPGHTSREVLIILSSLTTCDPA
NIYELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFKELLMLHVKPPP
ARSSSECSLIRMGFPQHTVASLTDQDVKPSFSMSHLDSSSDPDLSLRGYFCPQCQAKYTE
LPVECRVCGLTLVSAPHLARSFHHLFPLQDFIETPVEEHXGSRFCQTCQTELKDKNVFSC
PSCLSVFCVECDLFIHESLHCCPCCIHSRTTA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagtcagagagagctaagcgctgggagggcggctatgagaggacctgggag
gtgctgaaggaggatgagtccggctcacttaaagccacagtagaagaaatcctgtaccag
accaaaaggaaaagggtgacagagagccatggacaagtcaggctggggatgatgcgtcac
ctgtatgttgtgatcgactgttcacgcagcatggaggaccaggacctgaaaccaaaccgg
ctcacctcgactctgaagctgatggagacttttgtggatgaatattttgaccagaatccc
atcagtcaggtgggcatcatcatcaccaaaaacaaaagggcagagaagctgactgacctg
gcaggaaatcctaagaaacacatggctgctttgaagaaagctgtggacacctcgtgtgtg
ggagagccgtccctgtacaactctctgaacctggccttacagaccctcaggcatatgcca
ggacacacgagcagagaggtcctgatcatcctcagcagcctcaccacatgtgaccccgcc
aacatctatgagctcatcaagaccctgaagtctctaaaggtgcgggtgtcggtgatcggg
ctgtcggcggaggtacgggtgtgtacggtgctgaccagagagacgggcggctcgtaccac
gttatcctggatgagagtcacttcaaagaactactgatgctacatgtcaaacctcctcct
gcccgctcctcatcagagtgctctttaatacgcatgggtttccctcagcacacggtggcc
tctctgactgaccaggatgtcaaaccttcgttcagcatgtcacatctggacagcagcagt
gatccggacctgtccctgagggggtatttctgtccacaatgccaggccaagtacaccgag
ctccctgtggagtgtagagtctgtggtcttactttagtgtctgccccccacctggccagg
tccttccatcacctcttccccctccaggacttcatagagactccagtagaggagcatcrg
ggcagcaggttctgtcagacgtgtcagacggagctgaaggacaaaaatgtcttcagctgt
ccctcgtgtctcagtgtcttctgtgtggagtgtgacctcttcatccatgagtctctgcac
tgctgcccctgctgcattcacagtcggaccactgcgtga
DBGET
integrated database retrieval system
