Austrofundulus limnaeus (annual killifish): 106532324
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Entry
106532324 CDS
T06063
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04140
Autophagy - animal
alim04148
Efferocytosis
alim05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106532324 (vps41)
04148 Efferocytosis
106532324 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106532324 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106532324 (vps41)
Membrane trafficking [BR:
alim04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
106532324 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Vps39_2
TPR_7
TPR_19
Vps39_1
TPR_17
Frtz
zf-RING_5
Helicase_PWI
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
106532324
NCBI-ProteinID:
XP_013883812
UniProt:
A0A2I4CV04
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MAEVEDQQGRKTNEESLDESEEEDSEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLA
LGTHFGKVFLLDIQGNITQKFEISSVKINQISLDESGEHVGVCSEDGKVQVFGLYTREGF
HDNFDCPIKAVALHPQFSRSNYKQFVTGGNKLLLYERNWLNRWKMLPIHEGEGTITNIKW
RANLIVWANNLGVKIYDMTTKQRISNVLRDNVSLRPDMYPCSLCWKDDTTLIVXWGTSIK
ICVVKERNPTELRDLPSRYVEIVSAFETEFFICGLAPLVDQLVTLFFVKENSDQDEEFEA
RPRLDIIQPLPESCEEISSDALTVRCFKENECRDYRLEHSEGESLFYIISPKDIVVAKER
DQDDHIDWLLEKKKYEEALMAAEISFKNIKRHDVQKIGMSYINHLLENGDYDSAARKCQK
VLGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLKTDYEGFATLI
REWPGELYNNMAIVQAVSDHLKRDPTNSTLLTTLAELYTYDQRYDRALEIYLRLRHKDVY
QLIHKHNLFSSIEDKIVLLMDFDKEKAVDMLLDNEDKISIDRVVEELDGRPELLHVYLHK
LFKRDHHKGQRFHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVFLL
SRMGNCRRALQMIMEELEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTH
VDPILLIKRIKEGMEIPNLRDSLVKILHDYNLQILLREGCKKILVADSLSLLQKMQRTQM
RGVRVDEGNICESCHGTILPSDMAQPFSVVVFHCRHMFHKECLPSSGTIPGMQFCNICSA
KKRGPGSGILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtggaagaccagcagggaaggaagacaaatgaggaatccctagatgaatct
gaggaggaggacagcgaggaggagcccaagctgaagtatgagaggctctccaacggggtg
actgagatcctccagaaagacgcagccagctgtatgaccgtccatgacaagtttcttgcc
ctgggaacccattttggaaaagttttcctgctggacattcagggaaatattacgcagaag
tttgaaattagttcggtgaagatcaaccagatcagcctggatgagagtggagagcatgtg
ggcgtgtgctccgaggatgggaaggttcaagtgttcggcctttacaccagagagggcttc
catgataactttgactgtcccatcaaagcagttgcattacaccctcagttcagcagatca
aactacaaacagtttgtcacagggggtaacaagctgctgctgtatgaaaggaactggttg
aatcgctggaagatgttgcctatacatgaaggtgagggcacaatcacaaacatcaagtgg
agagctaacctgatcgtctgggccaacaacctgggagtaaaaatctatgacatgaccaca
aagcaacgaatctccaacgtgttgcgggataacgtcagcctgaggcctgacatgtacccc
tgcagtctgtgttggaaagatgacacaacgctcatagtcygctggggtacctccattaag
atttgtgttgtgaaagaacgaaatcctacagagttaagagatctgcccagccgctatgtg
gaaatagtttctgcatttgagactgaatttttcatctgtggcttggcgccgctggtcgat
cagctcgtcactctgttctttgtgaaggagaactcagatcaggacgaggagtttgaagca
cggcctcgtctcgacatcatccagcctctccctgagagctgcgaggagatctcctcagac
gctctgactgttcgttgtttcaaagaaaatgaatgtagagactaccgtctcgagcattcg
gagggagagtcgctcttctacatcatcagtcccaaagacatcgtcgtggccaaagagcga
gaccaagatgaccatatcgactggctgcttgaaaagaagaaatatgaggaggcactgatg
gctgcagagatcagcttcaaaaacatcaagagacacgacgttcagaaaatcggaatgagt
tacatcaatcacttgctggagaacggagactatgactctgccgcgaggaaatgtcaaaaa
gttcttggaaaaaacatggagctgtgggagaatgaagtatacaggtttaagaccatcggg
cagctgaaggccatcagtcaatatttaccaagaggagatctgcgtctcagaccggccatc
tatgaaatgatcctgcatgaatttctaaaaacggactatgagggttttgccacactgatc
cgagagtggcctggagagctttacaacaacatggccattgttcaggccgtgagcgatcac
ctgaagagggatcccaccaacagcacgctgctcaccacactggctgagctgtacacttat
gaccagaggtacgacagagccttagaaatctacctgagactgagacacaaagatgtttat
cagctgatccacaaacacaacctgttctcctccatagaggataaaattgtcctcctgatg
gactttgataaagagaaagctgttgacatgcttctcgacaacgaagacaagatatctatt
gacagggtggtggaggaactagatggcaggcctgagctgctgcatgtgtacctccataaa
ctgttcaagcgggatcatcacaaaggccagaggttccacgagagacagattggtctgtac
gctgaatatgaccgtccaaacctcctgccttttttgagggatagcactcattgccctctt
gaaaaggctcttgagatttgtcagcagaggaactttgtggaagagactgtcttcttgctc
agcaggatgggaaactgtagacgagctctgcagatgatcatggaggagctggaggacgtg
gacaaggccatcgagttcgctaaagagcaagacgacgcagagctgtgggaggacctcatc
tcttactcgattgacaagccaccattcattaccggcctcctcaataatatcggcactcac
gtagatcccattctgctcatcaagcgcataaaagaaggcatggagatcccaaacctcaga
gattcactggtgaaaatcctccatgactacaacctacagattcttttgagggaagggtgc
aagaagatcctggtggcggactctctttctctgctccagaagatgcagcgaacgcagatg
agaggagtcagggtcgatgagggaaacatttgtgagtcatgtcacggcacaatattaccc
tcagatatggcccagcctttcagtgtggtggtgtttcactgcagacacatgtttcacaag
gagtgtttaccytcttcaggaacaattcctggaatgcagttttgtaacatctgtagtgca
aagaagcgaggacctggaagtggaatactggagatgaaaaaataa
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