Austrofundulus limnaeus (annual killifish): 106533553
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Entry
106533553 CDS
T06063
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106533553
Spliceosome [BR:
alim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106533553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Calcipressin
Motif
Other DBs
NCBI-GeneID:
106533553
NCBI-ProteinID:
XP_013885358
UniProt:
A0A2I4CZE4
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MLMSTDVASIMLPVSRTLMDRDRELDSAMAGGVHPNPGGAPAAVRGMKRGDPEPDGQAAA
ALLDSTGAECKRPRMDGSGGLGEVGQNNDPLTLGYHVYASHSQGSQDSAGGQEGLVPPPA
ECKRPRMDGSGGLGEVGQNNDPLTLGYHVYASHSQGSQDSAGGQEGLVPPPFSAFPPPPP
PPPQNGLALDYGSSLYAAGAVQGPVEAGGAGNSAANNSLSAQSDGSSQIESGVGSGGGGG
GGGPGDDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVT
FESSSDAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGIAALPYGTFIPS
AGWKLSPMVGAMYSPELYTVPGFPYPAAAAAAAATTAATFRGTHLRGRARPVYSAVRAAV
PQPAIPTYPGVMAYQDGFYGAADLYGGYAAYRYAQPTAVATPAAAAAAAAAYSDSYGRVY
TADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcatctatcatgctgcctgtgtcccggactctcatggac
cgggacagggagctggacagcgccatggccggcggggtgcatcccaacccgggcggcgct
cccgcagctgtgcggggcatgaagcgaggagacccggagcccgacggacaggcggccgcc
gcgctgctggactccaccggggcagagtgcaagcggccccgcatggacggctctgggggg
ctcggtgaggtcggacagaacaacgacccgctgacccttggttaccacgtctacgcgtct
cacagtcagggctctcaggatagtgctggcggtcaggagggactcgtgcccccaccggca
gagtgcaagcggccccgcatggacggctctggggggctcggtgaggtcggacagaacaac
gacccgctgacccttggttaccacgtctacgcgtctcacagtcagggctctcaggatagt
gctggcggtcaggagggactcgtgcccccacctttctccgcgttcccaccacctccgccg
ccgccccctcagaacggcctggccctggattacgggagcagcctgtatgcagcaggggcc
gtgcagggccccgtggaagctggaggagcagggaacagtgcagccaacaacagcctcagt
gcccaatcagatgggtcctcccagatcgagtcgggagttggctcaggtggagggggtggt
ggtgggggtcccggggacgactcggatgccaaggggacccccaaacgcctccacgtatcc
aacatcccttttcgcttccgagaccctgacctgcggcagatgtttgggcaattcggcaaa
atcctcgacgtcgagatcatcttcaacgagaggggctccaagggctttggttttgtcacg
ttcgagtcgagttcagacgcagagcgagccagagagaagctccacggcacgctggtggag
ggacgcaagattgaggttaataacgcgacagccagagtgatgacaaacaagaagatgaca
acaccgtactctaacggagagggcatcgcagcactaccatacggtacatttattccctca
gctggttggaagttgagtccgatggttggagccatgtacagtcctgagctttacacggtt
ccagggtttccttaccccgcagcagcagcagcagctgccgccaccacagccgcaaccttc
cgaggcacccacctccggggtcgagctcggcccgtctacagcgccgtcagggcagctgtc
ccgcagcccgccatccccacgtaccccggtgtgatggcctatcaggatgggttttacggt
gcggccgacctctatggtggctatgcggcgtatcgttacgcccagccgacggccgtagcg
actcctgcagcagccgccgccgcggcagcagcttacagtgacagctacggacgggtttac
acggcagacccctaccatgcagctcttgccccagctgcctacggtgtcggagctatggcc
acgctgtacaggggaggctacagtagatttgccccttactaa
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