Austrofundulus limnaeus (annual killifish): 106535568
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Entry
106535568 CDS
T06063
Name
(RefSeq) cGMP-gated cation channel alpha-1-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
106535568
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106535568
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106535568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF2207_C
Connexin
OATP
SLC52_ribofla_tr
Sec62
Presenilin
MDM10
Tim54
LRRC37AB_C
Motif
Other DBs
NCBI-GeneID:
106535568
NCBI-ProteinID:
XP_013888062
UniProt:
A0A2I4D753
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MKKKEKKEKKEKEKQEKKEQKERKQKEEKEKEKEKQEKEKKAKEEAAKEIKVFDPAGNTY
YHWLFIITIPVMYNWTLIIARACFEELQTDYLFLWYFLDFVSDVVYVLDMVFRTRTGYLE
QGLLVKDELKLRERYMNTFQFKLDLVSMIPTDVLYLILGTTYPEIRLNKLLRFNRMMEFF
QRTETRTNYPNALRISNLVMYIIIIIHWNACLYYSFSKAIGFGADRFVYPDPADPEFGRL
VRKYAYSMYWSTLTLTTIGETPPPVENSEYFFVVTDFLVGVLIFATIVGNVGSMITNMNA
ARADFQSRIDAIKQYMSFRKVTKDLEKRVIKWFDFLWTNKKAVDEREVLKYLPDKLRAEI
AINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLA
VVADDGVTQFVVLSEGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEAL
TEYPDAKALLEEKGRQILMKDGLLDLEVAAQGPDPKEMEEKVDRMTGNLDSLQTQYARLL
AEHEATHSKLKHRVTRLERKMAPPPQAPPPSTPETQTTKGEEKK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaagagaagaaagaaaagaaagaaaaagagaaacaggagaaaaaggagcag
aaggagagaaaacagaaggaggagaaggaaaaggagaaagagaaacaggagaaagaaaag
aaggccaaagaggaggcggccaaggagatcaaagtctttgatccagcaggaaacacctac
taccactggctcttcatcatcaccatccccgtcatgtacaactggaccctcatcatcgcc
agagcctgctttgaggagctgcagacagattatttgttcctgtggtacttcctggacttt
gtctctgatgtggtctatgtcctggacatggtcttcaggaccaggactggttacctggag
cagggtctgctggtgaaggatgagctgaagctacgggarcgctacatgaacaccttccag
tttaagctggacctggtctccatgattcccactgatgtcctctacctgattctggggacc
acctaccccgagatccgcctgaacaaactgctgaggttcaacaggatgatggagttcttc
cagagaaccgagaccagaactaactaccccaacgcccttcgtatctccaacctggtcatg
tacatcatcatcatcatccactggaacgcctgcctctactactccttctccaaggccatc
ggttttggtgccgacaggttcgtgtaccctgacccggcagatccagagtttggtcgtctg
gtgaggaagtacgcctacagcatgtactggtccacgctgacactcaccaccatcggggaa
accccrccccctgtggagaactcagagtacttctttgttgtgacggacttcctggtgggc
gttctgatmtttgccaccatcgttggtaacgtgggctccatgatcaccaacatgaacgct
gccagagcygacttccagtctcgcattgacgccatcaaacagtacatgagcttcaggaag
gtcacaaaggacctggagaagcgagtcatcaagtggtttgacttcctgtggaccaataag
aaagcagtggatgagagggaggtgctgaagtacctgcctgacaagctgagagccgagatc
gccatcaacgttcacctggacactctgaagaaggtccggatctttgcggactgcgaggct
ggcctgctggtggagctggtgctgaagctgcagcctcaggtcttcagtccaggagactac
atctgcaagaagggcgacatcggcagggagatgtacatcatcaaggaggggaagctggcc
gtggtcgctgacgatggcgtcacgcagttcgtcgttctcagcgagggaagctacttcggt
gagatcagcatcctggccatcaaaggcagtaaggcaggaaacaggaggacagcraacatc
aggagcatcgggtactcggacctgttctgtctgtccaaagacgacctgatggaggcgctg
acggagtaccctgacgctaaagctctgctggaggagaaggggaggcagatcctgatgaag
gacgggctgctggacctggaggtggcagcacagggcccggaccccaaggagatggaggag
aaggtggaccggatgacgggtaatctggactccctgcagacccagtacgcccggctgctg
gcagaacatgaagccactcacagcaaactcaaacacagagtcacacggctggagaggaag
atggccccgcccccacaggccccgcccccttccactcctgagactcaaaccaccaaagga
gaggagaagaagtaa
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