Poseidonibacter lekithochrous: ALEK_0932
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Entry
ALEK_0932 CDS
T06860
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
alk
Poseidonibacter lekithochrous
Pathway
alk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ALEK_0932 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alk03400
]
ALEK_0932 (uvrB)
DNA repair and recombination proteins [BR:
alk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ALEK_0932 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ALEK_0932 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
Microtub_bd
SWI2_SNF2
AAA_30
DUF87
UB2H
AAA_7
DUF4139
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKJ22213
LinkDB
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Position
948665..950638
Genome browser
AA seq
657 aa
AA seq
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MAKFEVVSEYEPAGDQPQAIEALSDSILEGNKYNTLLGVTGSGKTYTMAKVIEKTQKPTL
IMTHNKTLAAQLYSEFKQFFPNNHVEYFISYYDYYQPEAYIPRTDLFIEKDSSINEELER
LRLSTTASLLSFDDVIVVASVSANYGLGNPEEYKAMVQRIEVGYEYSQREFLLKLVEMGY
KRNDKFFDRSDFRVNGDVIDIYPAYYEDEFIRVEFFGDEVESITKHEYLTNNKTQGVEEV
IIYSVNPFVVSNDKLAVAVKQIEEELEERLFNLKENDKLVEHQRLKQRVEFDLEMIEGTG
MCKGIENYARHLTGQKPGETPYSLMNYFESMTDEFLLIVDESHVSLPQFRGMHAADRSRK
EVLVDYGFRLPSAMDNRPLKFDEFIEKKASYLFVSATPNELEVEKSTVVAEQIIRPTGLV
EPKIEIMDSEFQVEKLHDEIKRVVAKNERVLVTVLTKKMAEELSSYYSDLGIKVKYMHSD
IDAIERNHIIRQLRLGEFDVLVGINLLREGLDIPEASLIGILDADKEGFLRSRTALIQTM
GRGARNENGKVILFAKRITDSMQFAIDETNRRRKIQEAHNKEHGIIPKSTKRRLDGSLKL
EEYDETAWKKEKVEKMPASERKKILVELNKQMKKASKDLNFEEAIRLRDEIDKVKKI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atagcaaagtttgaagtagtaagtgaatatgaaccagcaggagatcaaccacaagcaata
gaagctttaagtgattctattctcgaaggtaataaatataatacacttttaggtgttact
ggttctggtaaaacatatacaatggctaaggttattgaaaaaactcaaaaacctacattg
attatgactcataataaaacactagcagcacagctgtattctgagtttaaacaatttttc
cctaataaccatgttgaatactttatttcgtactatgattattatcaaccggaagcttat
attccaagaactgatttatttattgaaaaagattcctctattaatgaagaattagagaga
ctaagacttagtactactgcttcattactttcttttgatgatgttattgttgtagcttct
gtatctgctaactatggtttaggaaatcctgaagagtataaagcaatggttcaaagaatt
gaagttggatatgaatactcacaaagagaatttttactaaaactagtagagatgggttat
aaaagaaacgataagttttttgatagatctgattttagagtaaatggtgatgtaattgat
atttacccagcttattatgaagatgaatttattagagttgaattcttcggtgatgaagta
gaatctattacaaaacatgaatatcttacaaataataaaactcaaggggttgaagaagta
attatctattctgttaatccctttgttgtatcaaatgataaattagcagttgctgtaaaa
caaatagaagaagaattagaagagagattatttaatctaaaagagaatgacaagctagtt
gaacatcaaagattaaaacaaagagtcgagtttgatttagagatgattgaaggtactgga
atgtgtaaaggtattgaaaactatgctcgacatctaactggtcaaaagccaggtgaaact
ccatactcactaatgaactattttgaatcaatgactgacgagtttttattaattgttgat
gaatcacatgtatcccttcctcaatttagaggaatgcatgcagctgatagatctagaaaa
gaagtattagttgattatggatttagacttccaagtgctatggataatagaccactaaag
tttgatgagtttattgaaaagaaagcttcatatctttttgtatcggcaacaccaaatgaa
ctagaagttgagaaatcaacggtagtagctgaacaaattattagaccaactggattagtt
gaaccaaaaatagaaattatggattctgaattccaagttgaaaaactacatgatgaaatc
aaaagagttgttgctaaaaacgaaagagttttagtaacagttcttactaaaaagatggca
gaagaattaagctcatactatagtgatttaggtatcaaagttaagtatatgcactctgat
attgatgcaattgaaagaaaccatattattagacaactaagacttggtgagtttgatgta
cttgttggaattaacttacttagagaaggtcttgatattccagaagcttcacttattggt
attttagatgcagataaagaagggttcttaagatcacgtacagcacttattcaaactatg
ggtagaggtgctagaaatgaaaatggtaaagtaatcctttttgctaaaagaataacagac
tctatgcagtttgcaattgatgaaactaatagaagaagaaaaatccaagaagctcacaat
aaagagcatggaattattccaaaatcaactaagagaagattagatggaagtctaaaactt
gaagagtatgatgaaacagcttggaaaaaagaaaaagttgaaaaaatgccagcctctgag
agaaagaaaatcttagttgagttaaataaacaaatgaaaaaagcttcaaaagatttaaat
tttgaagaagcaattagattaagagatgaaatagataaagttaaaaagatttaa
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