Alkalimarinus alittae: NKI27_13830
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Entry
NKI27_13830 CDS
T08567
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
alkm
Alkalimarinus alittae
Pathway
alkm00521
Streptomycin biosynthesis
alkm00523
Polyketide sugar unit biosynthesis
alkm00541
O-Antigen nucleotide sugar biosynthesis
alkm01100
Metabolic pathways
alkm01110
Biosynthesis of secondary metabolites
alkm01250
Biosynthesis of nucleotide sugars
Module
alkm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NKI27_13830 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NKI27_13830 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NKI27_13830 (rfbC)
Enzymes [BR:
alkm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NKI27_13830 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Nudc_N
Motif
Other DBs
NCBI-ProteinID:
UZE95141
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Position
complement(3061475..3062008)
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AA seq
177 aa
AA seq
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MKVIQTKLDGCVIIEPKVFGDERGFFKETFQAERYKEAGLTLPFVQDNYSRSTRGVLRGL
HFQKTKPQGKLVSCSAGEVFDVAVDLRPGSPTYGQWEGVTLSENNHIQFYVPPGFAHGFV
VISEAADFLYKCTDYYDPADEGGIIWNDPDVGISWPFVSPLLSDKDRQLPTLRALND
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttatacaaacaaaattagacggttgcgtgattattgagcctaaagtgtttgga
gatgagagaggtttttttaaagagacttttcaagccgagcgctataaagaggcagggttg
acactcccttttgtgcaagataattactcacgctcaacacgaggggttttgaggggttta
cattttcagaaaaccaaaccgcaaggcaaactcgtgagttgttcagcaggcgaagtattt
gacgtggctgttgatttaaggccaggctcgccaacgtatggtcagtgggaaggggttacg
ctgtctgaaaataaccatattcagttttatgtcccccccggttttgctcatggatttgta
gttattagtgaagccgctgacttcctatataagtgtactgattactatgacccggctgat
gaaggtggcattatctggaatgatccagatgttggaataagctggccttttgtgtcgcct
ttattatcggataaagatcgacagctgcccacattacgtgcactaaacgactaa
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