Alkalimarinus alittae: NKI27_17945
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Entry
NKI27_17945 CDS
T08567
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
alkm
Alkalimarinus alittae
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alkm03000
]
NKI27_17945
Transcription factors [BR:
alkm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NKI27_17945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_30
Motif
Other DBs
NCBI-ProteinID:
UZE95906
LinkDB
All DBs
Position
complement(3979363..3980295)
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AA seq
310 aa
AA seq
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MTLTELKYIVTLASEKHFGKAAEKCFVSQPTLSVAVKKLEEELGVTLFERSKGHITVTEL
GQKLVLQSQKVLDQARMIKDIAQEGKNQLTAPLRVGAIYTIGPYLFPHLMPELRRSAPSM
PLYIEENYTKVLSEKLRDSSLDVIVVALPFDEPEVVTMPLYDEPFVVLLPKGHPLTEFDE
LNSKQLLSDNLLLLGPGNCFRDQVLESCPELMNAVNASAQSNEGGAKLITEGSSIETIRH
MVASGLGITVLPLSAAAVDHYGSDMLETRPFVDPVPFRTVGLAWRVTFPRPKAIDIVAMA
AGQCRAVNQG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacactcacagaactcaaatatattgtcacattagcgtcagaaaagcacttcggtaaa
gcggcagaaaagtgtttcgtcagccaaccgacactcagtgtggccgttaaaaagcttgaa
gaagagctcggcgttacgctatttgagcgaagcaaaggtcatattactgtgactgagctg
ggtcaaaagcttgttttgcagtctcagaaagtgcttgatcaggctcggatgattaaagat
attgctcaagagggtaaaaatcagctaacggcaccgcttcgtgttggagccatttataca
attggcccctatttattcccgcacttgatgcctgagttgcgccgctcggcaccgtctatg
ccgttgtatatagaagaaaactataccaaggtgctgagtgaaaagctcagagactctagt
ttagatgttattgttgtcgccctaccgtttgacgagcctgaggtggtgacgatgcctttg
tacgatgaaccttttgtggttttgttgccgaaaggacatccgttaaccgagtttgatgag
ttgaatagtaagcagctattgagtgataacctactgttattggggccaggaaattgcttt
cgagatcaggtgcttgaaagttgccctgaattgatgaatgcggtgaatgcctcagctcaa
tcgaatgaggggggggcaaaattaattactgaaggcagctcaattgaaacgattcgtcac
atggtcgcgtcaggcttaggaattacggtactgcctctatcggcagcggctgtcgaccac
tatggcagcgatatgctagaaactcggccgtttgttgaccctgtgcctttccgcaccgtg
gggcttgcttggcgagtgacgtttcctcgaccaaaagcgattgatattgtggcgatggcc
gcagggcagtgccgtgctgtcaatcaaggatga
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