Alcanivorax sp. NBRC 101098: AS19_00020
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Entry
AS19_00020 CDS
T03879
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
aln
Alcanivorax sp. NBRC 101098
Pathway
aln03030
DNA replication
aln03430
Mismatch repair
aln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AS19_00020
03430 Mismatch repair
AS19_00020
03440 Homologous recombination
AS19_00020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aln03032
]
AS19_00020
03400 DNA repair and recombination proteins [BR:
aln03400
]
AS19_00020
Enzymes [BR:
aln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AS19_00020
DNA replication proteins [BR:
aln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AS19_00020
DNA repair and recombination proteins [BR:
aln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AS19_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
BAP12853
LinkDB
All DBs
Position
1986..3086
Genome browser
AA seq
366 aa
AA seq
DB search
MKFSINREQLLKPLQQVAAVVEKRQTLPVLSNVLLEVGDGQLSMTGTDLELELVARLPLE
GELEPGETTVPARKLVDIAKSLPAEADIRFEVDGERMLVRSGRSRFTLSTLPASEFPNLE
EDAAGSSLEIKPDVLRGLIDRTAFSMAQQDVRYYLNGMLFELKSGRLRAVATDGHRLALC
DAELDVPVEEASVILPRKGVMELSRILGDSGEVARLTIGRNHVRIVVGAITFTSKLVDGK
FPEYDRVIPKEGSRKVVADRETLRQALARVAILSNEKYRGVRVQLSEGSLRIVANNPEQE
EAEEEVSVDFNGSPLEIGFNVSYLLDVLNTMGGTQAELEMGDSNSSALVFDPESKAAVYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcaatcaatagagaacagctgctcaagccgctacagcaggttgcggcagtg
gtggagaagcggcagaccttgccggtactgtccaatgtgttattggaagtgggtgatggc
cagctatctatgaccgggacagacctagagctggagttggtcgcccgtttgccacttgag
ggcgagcttgagcctggcgaaaccaccgtgccggcccgtaagctggtagacattgccaag
agcttgccggcggaggcggatatccgttttgaggtggatggtgagcgcatgctggttcgt
tctggccgtagccgctttactctgtccaccctgccggcctccgaattcccgaatctggaa
gaagatgccgctggcagtagccttgagattaagccggatgtgttgcgtggtctgattgat
cgaacagcgttttctatggctcagcaagatgtgcgctattacctgaacgggatgcttttt
gaacttaagtctggccgtttgcgtgcggtggctaccgatggccaccgactggccctgtgc
gatgcagaactggatgtgccagtggaagaggcgtcggttattctgccgcgcaaaggggtg
atggaactatcgagaatccttggggatagcggtgaagttgcacgcctgaccattggtcgt
aatcatgtgcgcatcgtggtcggagcgatcactttcacgtccaagttagttgatggtaag
tttccggaatatgaccgagtaatcccgaaggaaggatcccgtaaggtggtggctgaccgt
gagaccctgcgccaagcgttggctcgggtggcgatcctttctaacgaaaagtaccgtggt
gtgcgggtgcagttgtctgagggtagtttgcggattgtggctaacaacccagagcaggaa
gaagcggaagaagaagtgtccgtagattttaatggctcgcccttggagattggtttcaat
gtcagctatctgttggacgtgctgaatactatgggtggcacgcaggcggaattggagatg
ggtgatagcaatagcagtgccctggtttttgatcctgagagtaaggcagccgtgtatgtg
gttatgccgatgcgcctctga
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