Alcanivorax sp. NBRC 101098: AS19_11270
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Entry
AS19_11270 CDS
T03879
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
aln
Alcanivorax sp. NBRC 101098
Brite
KEGG Orthology (KO) [BR:
aln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aln03009
]
AS19_11270
Enzymes [BR:
aln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
AS19_11270
Ribosome biogenesis [BR:
aln03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AS19_11270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BAP13978
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All DBs
Position
1236175..1237128
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AA seq
317 aa
AA seq
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MSEDTPAANRVTFVTIDEGRHGQRLDNFLFTHLKGVPKSRVYRIIRSGEVRVNKGRAKQT
TRLCTGDVVRVPPIRTSDSTAPAAVSEGLAERLRRACVYEDDQLFVFNKPAGLAVHGGSG
VSLGLIEALRVMFPQERELELVHRLDRDTSGLIMVARRRSFLRKLQRLMQGGQIEKRYWL
LCQGFKGKERTLDAPLLKMMNGNERIVRVSREGKPSVTHFRLLERFAQAQLVEATLETGR
THQIRVHSQFGGFALLGDSKYGIAKGEALLAEIGRRRLCLHARTLVFVHPNTGKRLTVTA
PLDDDYEAILTALRSKP
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagatacccccgcagcgaacagggtgacgtttgtcaccattgatgaaggccgg
cacggtcagcgcctggataatttcttgtttactcaccttaaaggtgtgcccaagtctcga
gtttaccggattatccggtccggagaggtgcgggttaacaaggggcgagccaagcagacc
acccgactgtgtactggcgatgtggtgcgtgtcccgcccattcgcaccagtgactccacc
gcgcctgcggcggtgagtgagggcttggctgagcgtctgcgccgggcctgtgtctatgaa
gatgatcagttatttgtttttaataaacctgcgggcttagcggtgcatggaggcagtggc
gtcagcctgggcttgattgaagcgttgcgggtgatgttcccgcaagagcgggagctggag
ctggtgcaccgactggatcgcgataccagtggtttgatcatggtggcccgtcggcgctcg
tttctgcgtaaactgcagcgcttgatgcagggcggccagattgaaaaacgttactggctt
ctctgccaagggtttaagggtaaggagcgcacgctggatgcgcccttattgaaaatgatg
aatggcaatgagcgtatcgtcagagtatcgcgtgagggcaaaccctctgtgacgcatttt
cgcctccttgagcggtttgctcaggcgcagctggtggaggctaccctggaaaccggccgc
acccaccaaattagagtgcatagtcagtttgggggctttgcactgctgggtgatagcaag
tacggcatcgctaaaggggaggcgttgttggctgaaattggccgccgccggctctgctta
catgcccgaactctggtttttgtgcacccgaatacgggtaaaaggctgacggttaccgcg
ccgctggatgatgactacgaggccattttgactgccctgaggagcaaaccatga
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