Alteromonas naphthalenivorans: ambt_06700
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Entry
ambt_06700 CDS
T01513
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
alt
Alteromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alt03016
]
ambt_06700
Enzymes [BR:
alt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ambt_06700
Transfer RNA biogenesis [BR:
alt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ambt_06700
Prokaryotic type
ambt_06700
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
AEF02875
UniProt:
F5Z4D5
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All DBs
Position
1508163..1509137
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AA seq
324 aa
AA seq
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MARRRKGRDINGIVLLDKPLGGSSNQLLQKVRWLFKASKGGHTGALDPLASGMLPLCLGE
ATKFSQFLLDAEKTYEVTATLGIRTTTSDADGEVVEEKPVTVDEETVRNTCLQFLGKSKQ
VPSMFSALKHQGKPLYHYARQGITVEREARDIEIFELEVTRIALPEVDMRVKCSKGTYIR
SLVDDIGQILKCGAYVTRLHRTEVADYPTDKMVSLDTLIATQEALEEGDFAALDAFMIPM
DTAVSRLPLVCINEAEKHRFDNGQSVKGTCDEPLEVGQPYRVYFGESEQGLFLGVGEGVK
DPKDQAGSNGDIFVNPKRRVVFNQ
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcgtcgtaaaggccgcgatattaacggcatagtattgctagataagccatta
ggcggttcttcaaaccaacttcttcaaaaggtacgttggttgttcaaagcttcaaaaggt
ggccatacgggcgcgctagaccctttggccagcggtatgctgcctttgtgtttaggtgaa
gccactaaattttctcaattcttattggatgcggagaaaacctatgaagtcaccgcaacc
ttagggattcgcaccaccacttctgatgctgacggtgaagtcgttgaagaaaagccggtg
acggtggatgaagaaacagttcgaaacacgtgtttgcaattcttagggaagagtaaacaa
gtcccttctatgttttcggcgctaaaacaccaaggcaaacctctttatcattatgcccgt
cagggaataacggttgagcgtgaagcgagagatattgaaatatttgaacttgaagtcacg
cgaattgcgttgccagaagtggatatgcgcgttaaatgcagtaaaggcacttatattcgc
tcattagtagacgatattggtcaaattcttaagtgcggcgcttacgttactcgcttacat
cgcactgaagtggccgattatccaaccgataaaatggtgtctcttgatacgctaattgct
actcaagaagcactagaagagggtgactttgccgcacttgacgcatttatgatccccatg
gataccgccgtcagtaggttgcctttggtctgtattaacgaggctgaaaagcatcgcttt
gataacggtcaaagtgttaaaggtacctgcgatgagccgttggaagttggtcagccttac
cgggtttatttcggtgaaagcgaacaaggtttgtttttaggcgtaggtgaaggcgttaaa
gatccaaaggaccaagcggggtctaatggcgatatttttgttaacccaaaaaggcgggtt
gtgttcaaccaataa
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