Aspergillus luchuensis: AKAW2_40229A
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Entry
AKAW2_40229A CDS
T08060
Symbol
LIG4
Name
(RefSeq) DNA ligase (ATP)
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AKAW2_40229A (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aluc03400
]
AKAW2_40229A (LIG4)
Enzymes [BR:
aluc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AKAW2_40229A (LIG4)
DNA repair and recombination proteins [BR:
aluc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
AKAW2_40229A (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_N
DNA_ligase_A_M
BRCT_2
DNA_ligase_A_C
BRCT
RNA_ligase
LIG3_BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
64959871
NCBI-ProteinID:
XP_041542312
LinkDB
All DBs
Position
4:complement(581206..584235)
Genome browser
AA seq
1009 aa
AA seq
DB search
MDEEEASNHEKSHSYSQPSQQDSNLDEKYPNRPHNHSQTLPFHELFETLFNPLSELSKKP
TGSAVPRRKVGPHGQSAANLTPHEKRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDR
AMYGIKEKAIGKLLVKIMKIDKNSEDGFNLLNWKLPGQLATSRFMAGDFARRCYDVISKR
PMRTEVGNMSIEEVNDKLDQLSNASKEDQQLPILSEFYRRMNPEEMLWLIRIILRQMKVG
ATERTLFNVWHPDAANLYSISSSLRRVCWELHDPNIRLGAENSGISLMQCFQPQLAQFQM
QSFDRMIARMRGTEEDPVFWIEEKLDGERMQLHMQSDSSVPGGRRFRFWSRKAKDYTYLY
GKSLEDPNGALARHLKDAFADGVNSLILDGEMIAWNPEQGAPEPFGTLKTAALAEQRNPF
SNGSRPLFRVFDLLFLNGHDLTRYTLRDRRNALQKSVKSVHRRFEVHPYEEAIDKTQIEA
ALRRVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYGSGHR
GGGLASFLCGLRVDNASSSQGNTSTKCYSFCKVGGGFTAADYANIRHHTDGKWMDWNPKN
PPTAYIELAGGNAQHERPDQWIKPEDSVVLCVKAASVSISDQFRVGLTLRFPRFKRLRMD
KDWKSALSMQEFLDLKSNVEQEQKEKEFSVENFRKKRVKRPKKELTVAGYSPSAEVKYEG
PSGHIFDGFNFFILTDSVAPIKKSKAELEQLVKLNGGKIYQTNKAAPNTVCIADRRTVKA
ASLQKNGDVSIIRPSWILDCVRQNEIDAGLPDLLLPLEPRHMFFTTPSKEEEVLTSVDQF
NDSYARDVTREELVSLLDKMSADKGSSDVPPRGEATKKLREVIQERVDAGWDLPCGWLFQ
NLTFFFPDQTTQVPDAGNSEHPCCGYRLSLARNTARFAGATVVNDCEDPSITHVVVDPDT
PSTEIATLRKTLSARADQKLPHIVTTEWIKESWEQQSLLDEDRYHPRPA
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaagaggctagcaatcatgaaaaatcccactcctacagtcaaccctcacaa
caagactcaaacctggacgagaaatacccaaaccgtcctcacaaccactcccagacattg
ccatttcacgagctctttgagaccctgtttaatcctttgagtgagctctccaagaagccc
acaggatctgccgttcctcggcgaaaagtcgggcctcatggccagtcggcagcaaacctt
actccacacgaaaaacgacgggatgtcattgagcggttcatttcacgatggcggaaagaa
gtgggcgatgatatctatcctgccttccggctcattcttccggacaaagaccgtgaccgc
gccatgtacggtatcaaagaaaaggccatcggtaagttactggtcaaaatcatgaagatc
gacaagaactccgaggacggcttcaatcttttgaactggaagctgccagggcaattggct
acctcgcgctttatggcgggggactttgccagacgctgctacgatgttatctcaaaacgg
cctatgaggacggaggtgggcaatatgtcgatcgaggaggtgaacgacaagctcgaccag
ctttcaaatgcctccaaggaggaccaacagctgcccatcctgtcagagttctaccgaaga
atgaaccccgaggagatgctgtggctgatccgcattattcttcggcaaatgaaagtcggg
gctacagagcgaacgttattcaatgtatggcacccagatgctgcaaatctctatagcata
tccagtagtcttcgacgtgtttgctgggagctgcatgatccaaacatccgactgggggct
gaaaacagtggcatttctctgatgcaatgctttcagccccaactagctcagtttcaaatg
cagtcctttgatcgaatgattgcccggatgcggggtacagaagaagaccctgtattctgg
attgaggagaaactcgacggggagcgtatgcagcttcatatgcagtctgacagctcggtg
ccaggaggaaggaggtttcgcttctggtcgaggaaagcgaaagattacacctacctctat
ggaaagagcctcgaggaccccaatggtgccttggccagacatctcaaagacgcctttgca
gacggtgtcaacagtttgattctggacggtgaaatgattgcttggaatcctgagcagggc
gcccctgaaccatttggcacattgaagaccgccgcattagccgaacagagaaacccgttc
tcgaatgggtcacggccgctttttcgtgtttttgatctactcttcttgaacgggcacgat
ctgaccaggtacactcttcgcgatcgtcgaaatgctctgcagaaaagtgtaaagtcggtc
caccgtcggttcgaagtccatccttacgaggaagctatagataagacccagattgaagcg
gcgcttcgaagagttgttgcggaggcttcagagggactagtgctcaaaaacccgagatcc
ccctatcgcctcaatgaacgacatgacgactggatgaaagtgaagcctgaatacatgaca
gagtttggggagtccctggatctgatagttataggcggctactatggcagtggtcaccga
ggagggggtcttgcaagttttctgtgtggattgagggtcgataatgctagctcttcgcaa
gggaacacgtccaccaaatgctattctttctgcaaggtcgggggaggctttacggcagca
gactatgcaaacatccgtcatcatactgatggcaaatggatggactggaaccccaaaaat
ccgccaacggcatacattgagctggcgggtggcaatgcacagcacgagcgtccagatcag
tggatcaaaccagaggattcggtggtcctctgtgttaaagcagcatcagtatcgatcagt
gaccaatttcgggtcggtctgacattgcgctttccgcggtttaagaggttacgcatggat
aaggactggaagagcgcgctttccatgcaagagttcctggatctgaagtcaaacgtggag
caagagcaaaaggagaaggaattcagtgttgagaacttccgcaaaaaacgggtgaagcga
ccaaagaaagaattgacggttgcaggatacagccctagtgcggaggtgaagtatgaaggg
ccgtcagggcatattttcgacgggttcaacttctttattttaaccgactcggtagcccca
atcaagaaatcgaaggcggagttggaacaacttgtcaaattgaatggaggcaagatatat
cagacaaacaaggccgctcccaacaccgtatgtatcgcggaccgaagaactgtgaaggca
gcttctctgcaaaagaatggcgatgtgagcatcatccgaccatcttggatcttagactgt
gtgaggcagaatgagattgatgcgggcctgccagacttgcttcttcccctggaacctcgg
cacatgtttttcactacgcccagtaaggaggaggaggtattgacgagtgtcgaccaattt
aatgacagctacgctcgggatgtcaccagggaagagctggtcagtttgcttgataagatg
agcgcggacaagggtagttccgatgtgcccccgagaggcgaagctaccaagaagcttaga
gaagttatccaagagagagtggacgcaggatgggatctcccatgcgggtggctttttcaa
aacttgacgttcttctttcccgaccagacaacgcaggttccagacgccgggaattcggaa
catccctgctgcggctatcgactatctttggctcgaaatacagccagatttgcaggtgcc
actgttgtcaatgattgtgaggacccctccatcacccatgtggttgtagatccggataca
ccatccacagagatcgccacgctaaggaagactttgtctgcccgagcagatcagaagctc
cctcacatagttaccacggagtggatcaaggaaagctgggagcagcagtcactgctcgat
gaagataggtatcatccaaggcctgcttga
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